Gene Pfl01_2307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2307 
Symbol 
ID3715531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2661057 
End bp2662004 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content65% 
IMG OID 
Productdihydrodipicolinate synthetase 
Protein accessionYP_348039 
Protein GI77458534 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.343371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA ACATCTTCAC CGGCTGCATG CCCGCCCTGA TGACCCCGTG CACCGCCGCG 
CGCAAACCGG ACTTCGATGC GCTGGTGGCC AAGGGTCGCG AGCTGATCGA CATCGGCATG
AGCGCCGTCG TGTACTGCGG CTCCATGGGC GACTGGCCGC TTCTCACCGA AGCCGAGCGT
CAGGAAGGCG TGGCGCGGCT GGTGGCCGCC GGGATTCCGA CCATCGTCGG CACTGGCGCG
GTCAACACCC GTGAAGCGGT GTCCCACGCG GCCCATGCGG CGAAGGTCGG CGCGCAGGGT
TTGATGGTGA TTCCTCGGGT GCTGTCCCGT GGTGCTTCGG CGGCTGCGCA AAAAGCCCAC
TTCGCGGCGA TTCTGCAAGC CGCGCCGAAC CTGCCGGCGG TGATCTACAA CAGCCCTTAC
TACGGCTTCG CCACCCGCGC CGACCTGTTC TTCGAACTGC GCCGTGAATA CCCGAACCTG
ATCGGCTTCA AGGAGTTCGG CGGTGGCGCC GACCTGCGCT ACGCCGCTGA AAACATCACC
TCCAAGGACG ATGCCGTGAC CCTGATGGTG GGTGTCGACA CCCAGGTCGT GCACGGCTTC
GTCAACTGCA ACGCCACCGG CGCCATCACC GGGATCGGCA ACGCCCTGCC CCGCGAAGTG
CTGCAACTGG TGGCCCTGAG CAAGCAGGCG GCCAAGGGTG ACGCCAAGGC CCGACGTCAG
GCCCGTGAGC TGGAATCGGC GCTGGCGGTG CTGTCGTCCT TCGACGAAGG CACGGATCTG
GTGCTGTATT ACAAACACCT GATGGTGCTC AACGGCGACA AGGAATACAC CCTGCATTTC
AACGAAACCG ATGCCTTGAG CGACTCGCAA CGCCGTTACG CGGAAGCCCA GTACGCGCTG
TTCCGTCACT GGTACGAAAA CTGGTCGGCG CAGCAGAACT TCGCCTGA
 
Protein sequence
MSDNIFTGCM PALMTPCTAA RKPDFDALVA KGRELIDIGM SAVVYCGSMG DWPLLTEAER 
QEGVARLVAA GIPTIVGTGA VNTREAVSHA AHAAKVGAQG LMVIPRVLSR GASAAAQKAH
FAAILQAAPN LPAVIYNSPY YGFATRADLF FELRREYPNL IGFKEFGGGA DLRYAAENIT
SKDDAVTLMV GVDTQVVHGF VNCNATGAIT GIGNALPREV LQLVALSKQA AKGDAKARRQ
ARELESALAV LSSFDEGTDL VLYYKHLMVL NGDKEYTLHF NETDALSDSQ RRYAEAQYAL
FRHWYENWSA QQNFA