| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2219 |
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| Symbol | |
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| ID | 3715687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 2541956 |
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| End bp | 2543455 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | glycolate oxidase subunit GlcD |
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| Protein accession | YP_347951 |
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| Protein GI | 77458446 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000941234 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTC TCTACGACGA ACAGGTCGAC GGCGTTTTGC CCGACGTCGA CAAGACTGCA
CTTCTGCAAG CCCTGCTGCA CCAATGGCCA GACCTGGAAG TGCTGCATCA GCGCGAAGAA
TTGAAGCCTT ATGAATGCGA TGGGCTGTCC GCCTATCGCA CCACGCCACT GTTGGTGGTA
CTGCCACGAC ATATCGATGA AGTTCAGGGC GTGTTGCGAA TCTGCCACGA ACGACGTGTG
CCGGTGGTGG CCCGGGGCGC CGGGACCGGA TTGTCCGGCG GCGCTCTACC GCTGGAAAAA
GGTGTGCTGC TGGTGATGGC GCGTTTCAAT AACATCCTGC ACATTGATCC CGCGGCGCGT
ACTGCACGGG TTCAACCCGG TGTGCGCAAT CTGGCGATCT CCCAGGCCGC GGCGCCGTTC
GGGTTGTATT ACGCGCCTGA TCCTTCCTCG CAAATCGCCT GCTCCATCGG CGGCAATGTG
GCGGAAAACG CCGGTGGCGT GCACTGCCTC AAGTACGGAC TGACCGTGCA TAACCTGCTC
AAGGTCGAGA TCCTCAGCGT CGATGGCGAA CGCCTGACAT TGGGATCGGA CGCGCTGGAT
TCCCCCGGTT TCGACCTGCT GGCACTGTTC ACCGGTTCCG AAGGCCTGCT CGGGGTGATT
ACCGAAGTCA CGGTCAAGCT CTTGCCCAAA CCGCAGACGG CCAAAGTGCT GCTGGCGGCA
TTCGACTCCG TGGAAAAGGC CGGCCGCGCA GTGGCCGACA TCATCGCGGC CGGCATCATC
CCCGGCGGCC TGGAAATGAT GGATAACCTG GCGATTCGCG CGGCCGAAGA CTTCATCCAC
GCCGGTTATC CGGTGGACGC CGAGGCGATT CTGCTCTGCG AGCTCGATGG CGTTGAAGCC
GATGTCCACG ATGATTGCAC GCGGGTCCGG CAAGTGCTCG AGCACGCCGG CGCCACCGAG
CTGCGCCAGG CCCGGGACGA GGCCGAGCGC GCGCGATTCT GGGCCGGACG CAAGAATGCC
TTCCCCGCCG TAGGACGATT GTCGCCGGAC TATTACTGCA TGGACGGCAC CATCCCGCGC
CGCGAGCTAC CCGGCGTACT GCATGCGATT GCTCAGCTTT CAGCTGTACA TGGCTTGCGG
GTTGCCAACG TCTTCCATGC CGGCGATGGC AACATGCATC CACTGATTCT GTTCGACGCC
AATCAGCCCG GCGAACTCGA ACGTGCCGAA GCGCTGGGTG GCAAGATCCT CGAACTGTGT
GTGAAGGTCG GCGGCAGCAT CACCGGCGAA CACGGCGTGG GCCGGGAAAA AATCAACCAG
ATGTGCGCGC AGTTCAACCG TGATGAGCTG ACCCTGTTCC ACGCCGTGAA AGCAGCCTTC
GACCCCGGAG GCCTGCTCAA TCCCGGCAAA AACATTCCGA CCCTGCATCG CTGCGCCGAA
TTCGGTGCCC TGCACGTACA CCATGGGCAA TTGCCCTTCC CCGAACTGGA GCGGTTCTGA
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| Protein sequence | MNILYDEQVD GVLPDVDKTA LLQALLHQWP DLEVLHQREE LKPYECDGLS AYRTTPLLVV
LPRHIDEVQG VLRICHERRV PVVARGAGTG LSGGALPLEK GVLLVMARFN NILHIDPAAR
TARVQPGVRN LAISQAAAPF GLYYAPDPSS QIACSIGGNV AENAGGVHCL KYGLTVHNLL
KVEILSVDGE RLTLGSDALD SPGFDLLALF TGSEGLLGVI TEVTVKLLPK PQTAKVLLAA
FDSVEKAGRA VADIIAAGII PGGLEMMDNL AIRAAEDFIH AGYPVDAEAI LLCELDGVEA
DVHDDCTRVR QVLEHAGATE LRQARDEAER ARFWAGRKNA FPAVGRLSPD YYCMDGTIPR
RELPGVLHAI AQLSAVHGLR VANVFHAGDG NMHPLILFDA NQPGELERAE ALGGKILELC
VKVGGSITGE HGVGREKINQ MCAQFNRDEL TLFHAVKAAF DPGGLLNPGK NIPTLHRCAE
FGALHVHHGQ LPFPELERF
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