Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2111 |
Symbol | |
ID | 3715906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2398311 |
End bp | 2399381 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_347843 |
Protein GI | 77458338 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.486094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.338973 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACATGC CAGTCACTTC GCTTCTTCGC CGGTCTTCGG CATTTTTCGG CTTGATGGTG TCCCTCTCGG GGCTTGTCGG TTGCGCGCTG ACAGGAACCT ATCAGGACGC CACCGGGCCC GACGCCGCCA AGATGCGTTT TGTGGCCAAC ACTGACAATG CCACCGTCAA TTACTTCGAC GCCGAGCATT GCGATGGCAT GACCACCGGC ATCCTGAACA ATTTATTTGT CAGAGACAGT CCGCGGCGGG TAGGCATGAC CGTGGCGCCT CCAGAGAAGG CCCGTGGTTA TCTGGAAGTG AAGTTACCGC CCGAAAAGGA AGTGTTCCTG CAGGTCAATA CCCAAGTGGG CTATGGCGTG TGTGGCGCGG TGTTCAGTTT CAGGCCTGAG CGCGCAACGG AGTATGAACT CACCTTCGAA CTCAAGGGCA GCCAATGCTC GACATTGATG CAGCGCCTGC AACGGGTTGA TGGCAAGGAT GTGCGTACAC CCGTCACTAT CAGGCGCGAT GGATTTGCCG CTTGCGAGGG TCGCAACCCG ATCTTTCCGA AACCACCCGC GCTGCTGCCC GATACGCCGG AGCGCACGGC AATGATCGAC CGGATCATCG ACGGGAGTGC TTTCGTACTC ATGAAGTCCG GGTCGGATCA AAAGCCTGTA GCAGCCTTTA CTCCCGAAAA ACTTGATGCG CTGATCAGCG AGCGCAAGGT CAAACTGGGT TTTGACATGC CAGAGGATTA CTGGACGTTG TATCGCCAGA ACCTGATCGA ATTCGGTAAT GAGACGGCGG CCGCTCAAGC TCAAACTCTG GAGCGCTCCA CCAATGAGTA TCGGCAACGT CTGCGCAGCG CTGAAGACAA GCAACTCAGA GAGTGGTCCC GTGCTGACGA TTCCTCTGGC AAACCTGGCA ACGCAGCGCC GGCCGATCAG GAAAAGTCGA TGATTGTGTA TTACTTCCAG ACGTCCAGAG CCGTGACATT GGAAGCGGTG AACCATCACA TGGACCGCAT GGCAAAAATG GATGCGCAAT ACAACGTTTG CTCGCGCTAT GCCGAGTGCT GGAAACGCTG A
|
Protein sequence | MNMPVTSLLR RSSAFFGLMV SLSGLVGCAL TGTYQDATGP DAAKMRFVAN TDNATVNYFD AEHCDGMTTG ILNNLFVRDS PRRVGMTVAP PEKARGYLEV KLPPEKEVFL QVNTQVGYGV CGAVFSFRPE RATEYELTFE LKGSQCSTLM QRLQRVDGKD VRTPVTIRRD GFAACEGRNP IFPKPPALLP DTPERTAMID RIIDGSAFVL MKSGSDQKPV AAFTPEKLDA LISERKVKLG FDMPEDYWTL YRQNLIEFGN ETAAAQAQTL ERSTNEYRQR LRSAEDKQLR EWSRADDSSG KPGNAAPADQ EKSMIVYYFQ TSRAVTLEAV NHHMDRMAKM DAQYNVCSRY AECWKR
|
| |