Gene Pfl01_2111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2111 
Symbol 
ID3715906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2398311 
End bp2399381 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347843 
Protein GI77458338 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.486094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.338973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC CAGTCACTTC GCTTCTTCGC CGGTCTTCGG CATTTTTCGG CTTGATGGTG 
TCCCTCTCGG GGCTTGTCGG TTGCGCGCTG ACAGGAACCT ATCAGGACGC CACCGGGCCC
GACGCCGCCA AGATGCGTTT TGTGGCCAAC ACTGACAATG CCACCGTCAA TTACTTCGAC
GCCGAGCATT GCGATGGCAT GACCACCGGC ATCCTGAACA ATTTATTTGT CAGAGACAGT
CCGCGGCGGG TAGGCATGAC CGTGGCGCCT CCAGAGAAGG CCCGTGGTTA TCTGGAAGTG
AAGTTACCGC CCGAAAAGGA AGTGTTCCTG CAGGTCAATA CCCAAGTGGG CTATGGCGTG
TGTGGCGCGG TGTTCAGTTT CAGGCCTGAG CGCGCAACGG AGTATGAACT CACCTTCGAA
CTCAAGGGCA GCCAATGCTC GACATTGATG CAGCGCCTGC AACGGGTTGA TGGCAAGGAT
GTGCGTACAC CCGTCACTAT CAGGCGCGAT GGATTTGCCG CTTGCGAGGG TCGCAACCCG
ATCTTTCCGA AACCACCCGC GCTGCTGCCC GATACGCCGG AGCGCACGGC AATGATCGAC
CGGATCATCG ACGGGAGTGC TTTCGTACTC ATGAAGTCCG GGTCGGATCA AAAGCCTGTA
GCAGCCTTTA CTCCCGAAAA ACTTGATGCG CTGATCAGCG AGCGCAAGGT CAAACTGGGT
TTTGACATGC CAGAGGATTA CTGGACGTTG TATCGCCAGA ACCTGATCGA ATTCGGTAAT
GAGACGGCGG CCGCTCAAGC TCAAACTCTG GAGCGCTCCA CCAATGAGTA TCGGCAACGT
CTGCGCAGCG CTGAAGACAA GCAACTCAGA GAGTGGTCCC GTGCTGACGA TTCCTCTGGC
AAACCTGGCA ACGCAGCGCC GGCCGATCAG GAAAAGTCGA TGATTGTGTA TTACTTCCAG
ACGTCCAGAG CCGTGACATT GGAAGCGGTG AACCATCACA TGGACCGCAT GGCAAAAATG
GATGCGCAAT ACAACGTTTG CTCGCGCTAT GCCGAGTGCT GGAAACGCTG A
 
Protein sequence
MNMPVTSLLR RSSAFFGLMV SLSGLVGCAL TGTYQDATGP DAAKMRFVAN TDNATVNYFD 
AEHCDGMTTG ILNNLFVRDS PRRVGMTVAP PEKARGYLEV KLPPEKEVFL QVNTQVGYGV
CGAVFSFRPE RATEYELTFE LKGSQCSTLM QRLQRVDGKD VRTPVTIRRD GFAACEGRNP
IFPKPPALLP DTPERTAMID RIIDGSAFVL MKSGSDQKPV AAFTPEKLDA LISERKVKLG
FDMPEDYWTL YRQNLIEFGN ETAAAQAQTL ERSTNEYRQR LRSAEDKQLR EWSRADDSSG
KPGNAAPADQ EKSMIVYYFQ TSRAVTLEAV NHHMDRMAKM DAQYNVCSRY AECWKR