Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2072 |
Symbol | |
ID | 3716043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2357684 |
End bp | 2358610 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | LysR family transcriptional regulator |
Protein accession | YP_347804 |
Protein GI | 77458299 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTTCA AGCATCGCTA TCAGGTCGAA TCCATGGAAA CCCTCGCCAA TCTGGAATCT TTCGTCCGCA GCGCCGAGAC CGGCAGCTTC TCCGCCGCCG CACGGTTGCT GGCGCTGACC CCGGCGGCGG TCAGTCGCAA CGTGGCAATT CTTGAACGCA ACCTCGGCGT GCGGCTGTTT CAGCGCTCGA CCCGCAAGCT GTCGCTGACC GAGGTTGGTG AGAGTTTTCT GGCGAGCATC GGCGGCAACC TCGATGCCTT GCAGGCCGCG ATTGCTACGG TGGCGACCGA GCGCGGAGAG CCGGCGGGCG TGCTCAAGAT CAGCCTGCCG CCGACGTTCG GCATCGATCA CATGCTGCCG CTATTGCCGG AGTTTCTGGC GCGCTATCCG TTGATTCGCC CGGAATGGCA CTTCGAAAAT CGTCAGGTGG ACTTGATCGC CGAGGGTTAC GACGTAGCGA TTGACGGCGG ATTCGAGCTG ACACCCGGCG TAGTCGCCCG GCCATTGTCG TCCGCCGAAG TGCTGGCGGT GGCGTCGCCG GCGTATCTGG CGGGCCGTAC CCTGCCGCGA CATCCGGCTG ATCTCGCCGA TCACCAGGGC ATCGTCATGC GCGGCCTGCG CACCGGGCGC CTGCGCCAAT GGCAGATGCA CAACGAAACC GGCGAACAGG CCAGCGCCCT GCTCAACCCG AGCATCGTGC TGAATGACCC GATGGCCATG CGCAAGGCCG CGCTGCTGGG CTTGGGCGTG ACGATGCTGG TGCTGCCGGA TGTCAGCGCG CAGATCGAAC GCGGTGAACT GGTGCAGCTG TTGCCCGACT GGCAATGCGA TGCCGGCGCA ATATCGTTGT ACTACCCGAG CCGAACCTTG CTGCCGGCCA AGACCCGAGT GTTCATTGAT TTTGTGGTCG AAGCGTTTGG CCGCTAG
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Protein sequence | MIFKHRYQVE SMETLANLES FVRSAETGSF SAAARLLALT PAAVSRNVAI LERNLGVRLF QRSTRKLSLT EVGESFLASI GGNLDALQAA IATVATERGE PAGVLKISLP PTFGIDHMLP LLPEFLARYP LIRPEWHFEN RQVDLIAEGY DVAIDGGFEL TPGVVARPLS SAEVLAVASP AYLAGRTLPR HPADLADHQG IVMRGLRTGR LRQWQMHNET GEQASALLNP SIVLNDPMAM RKAALLGLGV TMLVLPDVSA QIERGELVQL LPDWQCDAGA ISLYYPSRTL LPAKTRVFID FVVEAFGR
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