Gene Pfl01_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1988 
Symbol 
ID3716126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2269485 
End bp2269958 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347720 
Protein GI77458215 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0923651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.190547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCT CCCAACGCGG TTTTACCTTG ATCGAAGTCG TGGTGACGCT GGCCCTGATC 
GGCCTGCTGG CCGGCATGGC CGCGCCGCTG ACCGAGACCC TGGTACGGCG TGGCAAGGAG
CAGGAACTGC GCACCGCGCT GTATCAGATT CGCGATGGCA TCGACGCCTA CAAGCGTGCC
TTCGATGCCG GCTACATCGA GAAATCCCTG AACAGCAGCG GCTATCCGCC GAACCTGAAA
GTGCTGGTCG AAGGCGTGCG CGACGTGCGC AGTGCCAAGG GTGCGAAGTT CTATTTTCTG
CGCCGGATAC CGCGGGATCC GCTGGTGCCG GCCAAACGTG ACGACAACGG CGGTTGGGGC
CTGCGGGCCT ACAACAGTTC GGCCCAGAAC CCGCGCGATG GCGAGGACGT GTTCGACGTC
TACTCCCTCG CCCGGGGTAA AGGCCTCAAC GGCATCGCGT ACCGCGAGTG GTGA
 
Protein sequence
MNASQRGFTL IEVVVTLALI GLLAGMAAPL TETLVRRGKE QELRTALYQI RDGIDAYKRA 
FDAGYIEKSL NSSGYPPNLK VLVEGVRDVR SAKGAKFYFL RRIPRDPLVP AKRDDNGGWG
LRAYNSSAQN PRDGEDVFDV YSLARGKGLN GIAYREW