Gene Pfl01_1984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1984 
Symbol 
ID3716122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2266040 
End bp2266585 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content65% 
IMG OID 
Productfimbrial assembly 
Protein accessionYP_347716 
Protein GI77458211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.207869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.57663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCT TGAACCTCGA CTTCCAGCCT CGTCCGCGCT CAGGCCCGTT GGGCTGGAGC 
CTGCTCGGCG GCGGTGTGTT ACTCGCGCTG GTGTGCTTCG GCCTCCAGCA GCACCTCGGC
GAGCAGGCCG AGCAACAACA AGGTCACTTG CAGCACACCC AGCGCCAGCT CACCGGCGAC
AGCGGCTCCA AGACAACGCT GAGCCCGGCG GAAACCCGCG AGCAGGCGCA GAACCTTGCT
GAAATGCGCA AGGTCTCGCA GCAACTGCGC CGCCCCTGGG AACGCCTGTT CGCCATGCTC
GAAGCCATGC CGCGCGACGA CATAGCCTTG CTGACCCTGA CCCCGGATGC GCGCAAGGGC
CAGGTGCGGA TCAGCGCCGA AGCCCGCGAT CTGCAAGCGA TGCTGGATTT CCACAAACGG
CTGGAGGCCA GTGACGAGCT GTCCGACGTG TCGCTGCTGA GCCACGAAAT CGTCGTCAAA
TCGCCGGAGC AACCGGTGCA ATTCAACCTG TCGGCGACCT GGGAGATAGG CGATGCGAAT
CCCTAG
 
Protein sequence
MRALNLDFQP RPRSGPLGWS LLGGGVLLAL VCFGLQQHLG EQAEQQQGHL QHTQRQLTGD 
SGSKTTLSPA ETREQAQNLA EMRKVSQQLR RPWERLFAML EAMPRDDIAL LTLTPDARKG
QVRISAEARD LQAMLDFHKR LEASDELSDV SLLSHEIVVK SPEQPVQFNL SATWEIGDAN
P