Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1984 |
Symbol | |
ID | 3716122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2266040 |
End bp | 2266585 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | fimbrial assembly |
Protein accession | YP_347716 |
Protein GI | 77458211 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.207869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.57663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGCCT TGAACCTCGA CTTCCAGCCT CGTCCGCGCT CAGGCCCGTT GGGCTGGAGC CTGCTCGGCG GCGGTGTGTT ACTCGCGCTG GTGTGCTTCG GCCTCCAGCA GCACCTCGGC GAGCAGGCCG AGCAACAACA AGGTCACTTG CAGCACACCC AGCGCCAGCT CACCGGCGAC AGCGGCTCCA AGACAACGCT GAGCCCGGCG GAAACCCGCG AGCAGGCGCA GAACCTTGCT GAAATGCGCA AGGTCTCGCA GCAACTGCGC CGCCCCTGGG AACGCCTGTT CGCCATGCTC GAAGCCATGC CGCGCGACGA CATAGCCTTG CTGACCCTGA CCCCGGATGC GCGCAAGGGC CAGGTGCGGA TCAGCGCCGA AGCCCGCGAT CTGCAAGCGA TGCTGGATTT CCACAAACGG CTGGAGGCCA GTGACGAGCT GTCCGACGTG TCGCTGCTGA GCCACGAAAT CGTCGTCAAA TCGCCGGAGC AACCGGTGCA ATTCAACCTG TCGGCGACCT GGGAGATAGG CGATGCGAAT CCCTAG
|
Protein sequence | MRALNLDFQP RPRSGPLGWS LLGGGVLLAL VCFGLQQHLG EQAEQQQGHL QHTQRQLTGD SGSKTTLSPA ETREQAQNLA EMRKVSQQLR RPWERLFAML EAMPRDDIAL LTLTPDARKG QVRISAEARD LQAMLDFHKR LEASDELSDV SLLSHEIVVK SPEQPVQFNL SATWEIGDAN P
|
| |