Gene Pfl01_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1961 
Symbol 
ID3716273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2237361 
End bp2238344 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content64% 
IMG OID 
ProductBeta-lactamase-like 
Protein accessionYP_347693 
Protein GI77458188 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATT TGGTACGCGG CGTAATCGGC TTGGCGTTGG TCGGTGTGAT GTCCAGCGCC 
ATGGCGCAGG CACCGCAGGT CGGCAAGCAG GCGCCGGGTT ATTTCCGGCT GGCGCTGGGC
GATTACGAGG TGACGGCGCT GTTCGACGGC TACAACGATT TGTCGCCGAA GCTGTTGCAG
GGCATGAGTC AAAGCCAGAT TCGCGCGCTG CTGGCCCGGC GCTCGATTGA AACGCCGGGC
GTGCAGACCG CGTTCAATGC CTTCCTGGTC AACACCGGCA AACAACTGAT TCTCGTGGAT
ACCGGCGCGG GCCAGTGCAT CGGCGCCACC GCCGGCCAGC TCTCGGCGAA CATGCAGGCA
GCGGGTTACA AGCCTGAGCA GGTCGACGCG ATTCTGCTGA CGCACCTGCA CCTGGATCAC
GTCTGTGGGC TGGTCGACGG CCAGCAACGG CCGATCTTTG CCAATGCCAC GGTTTATGCA
GCCAAGGCCG AAGCCGATTA CTGGCTCGAT CCGCAGGCCG AGGCGAAGGC GCCGGCCGGT
GCCCGGGAGT TTTTCAAGAT CGCCCAGGAT TCCACTGCGC CTTACGTGGC GGCCGGGCGC
TTCAAGACGT TCGCAGAGGG CCAGTCGCCT TTGCCGGGTG TGGTCGAAGC CACACTGGAA
GCCGGGCACA CGCCGGGCAG CACCACCTAC CGCTTCACTT CGCAGAACCA GAGCATCGTG
TTCATGGGCG ACCTGGTGCA CAACCTGGCG GTGCAGTTCG ATCATCCGGA GGTGTCGATC
CGCTTCGACG TCAACGGTCA GCAGGCGATC AAGAGTCGTA CCGCCGTGTT CAGTGCAGCG
GCGGCCAGCA AGACCTGGGT CACGGCCGCG CACTTGCCAT TCCCGGGCAT CGGCCACATC
ACGGCGGTCG ACAAGCACTT CCAGTGGGTG CCGGTTGAAT ACGGCCCCTA CAAACGCGCG
GCCAAAGTGC CGCTGATCGA GTAA
 
Protein sequence
MKDLVRGVIG LALVGVMSSA MAQAPQVGKQ APGYFRLALG DYEVTALFDG YNDLSPKLLQ 
GMSQSQIRAL LARRSIETPG VQTAFNAFLV NTGKQLILVD TGAGQCIGAT AGQLSANMQA
AGYKPEQVDA ILLTHLHLDH VCGLVDGQQR PIFANATVYA AKAEADYWLD PQAEAKAPAG
AREFFKIAQD STAPYVAAGR FKTFAEGQSP LPGVVEATLE AGHTPGSTTY RFTSQNQSIV
FMGDLVHNLA VQFDHPEVSI RFDVNGQQAI KSRTAVFSAA AASKTWVTAA HLPFPGIGHI
TAVDKHFQWV PVEYGPYKRA AKVPLIE