Gene Pfl01_1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1780 
Symbol 
ID3716578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1979406 
End bp1979723 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content64% 
IMG OID 
Productassimilatory nitrite reductase (NAD(P)H) small subunit 
Protein accessionYP_347512 
Protein GI77458007 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.307476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGC TCGATATCTG TGCCCTGGAA GAGATCAACG CCCTCGGTTC GCGGATCATC 
GCCGGGCCCA AAGGTGACAT TGCGATCTTT CGCACAAGCG ACGACGAAGT TTTCGCACTC
GATGACCGCT GCCCGCACAA GGGCGGCCCG CTATCCCAAG GCCTGATCTA CGGCAAACGT
GTCGCCTGCC CGCTGCACAA CTGGCAGATC GACCTGCAAT CCGGCGAAGC CCAGGCGCCG
GACGTCGGCT GCGCGCACCA TCACCCGGCC CGGGTCGAAA ACGGCCGCGT GCAACTGGCC
CTGCGGGATG CCGTCTGA
 
Protein sequence
MNWLDICALE EINALGSRII AGPKGDIAIF RTSDDEVFAL DDRCPHKGGP LSQGLIYGKR 
VACPLHNWQI DLQSGEAQAP DVGCAHHHPA RVENGRVQLA LRDAV