| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1688 |
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| Symbol | |
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| ID | 3716659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 1884738 |
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| End bp | 1886897 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_347420 |
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| Protein GI | 77457915 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.265093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCGCTC GTCTTTTTGC CCTGCCCTGC CTGTTTCTCG TCTGCCTGAT GACCCTGACG
TCGCCGGCAC CTGCCGACGC CGCCGGTCTG CCGGGACTGC TCACGGGTAG CGGCAAGGCT
CAGCCCGAAG CTCAGGAACC GCTCGGCCAG TCGCTGGACG AGGTCATCAA GTCGCTGGAA
AACGACAAGC AACGTGCCCA GTTGCTGACC GACCTGAAAA AACTGCGCGA TGCCACGAAA
AAAGCCCAGG CCACCCCGGA AGAAGGGGTA CTGGGACTGA TCGGCGGCAC CCTCGCCACT
TTCGAAAAAC AATTCTCTGG CGCCGACAGT CCGCTCAATC GCTGGTCCGC TGAATTCGAC
ATGGCCCAGG ACGAACTGAA AGGCCTGATG CTGCCGGCCA GCGAATGGCT GCCGATCATC
TTCGCCTTCG CCGTGATCCT CGCGGTCTGG AGCCTGCTCG CCGCCGCACT GATCTGGCTC
GGTCACCGGG TACGCATGCG CTTCGGCCTG ACCGAAGAAC TGCCGCAACA TCCCCGAGCC
CTCGACATGC TGCGCTTCGC CCTGCGCAAG CTCGGGCCGT GGATGATCGC CCTGGTCATC
ACGGTGTACA TGAGTTACGC ACTGCCCTCG TCGCTGGGCA AAAGCCTGGC GATGGTACTG
GCTTATGCGC TGGTGGTCGG CACCTGTTTC TCGGCCATCT GCGTGATCGC CTTCTCCGTA
CTCGACGGTC CGCACCGTCA TCGCGCGCTG TACATCCTGC GTCACCAGGC CTTTCGGCCG
CTGTGGCTGA TCGGCAGCTT CGCCGCGTTC GGTGAAGCCC TGAGCGATCC GCGACTGGTG
GCCGGTCTCG GCGTGCACCT GGCCCACACC GCCGCCACCG TCGCCAATGT CCTCGCGGCG
CTGTCGACCG GCCTGTTCAT CCTGCGCTTC CGCCGACCGA TCGCCCACCT GATCCGCAAC
CAGCCACTGT CCCGCCGCCT GACCCGCCGC GCCCTGAGCG ACACCATCGA AATCCTCGGC
ACCTTCTGGT ACGTCCCGGC GCTGGTGCTG GTGGGTATTT CGCTGTTCGC CACCTTCGTC
TCCGCCGGCG ACACCAGCAC CGCCTTGCGC CAGTCGCTGA TCTGCACCGT GCTGCTGGTG
TTGTGCATGG TCATCAACGG CCTCGTCCGC CGCCACGCCC TCAAACCCCA ACGCGGGCCG
AAACGCCACG CGCTATATTC CGAGCGCCTG AAAAGCTTCT TTTACACCCT CGCCCATTTG
CTGGTGTGGC TGGCCTTCAT CGAACTCGGC CTGCGGGTGT GGGGCATGTC ACTGATCGGC
TTCACCGAAG GCGAAGGCCA CGACGTCAGC GTCAAACTGT TCAGTTTGAT CGGCACGCTG
ATCTTCGCGT GGCTGGTCTG GATCCTCAGC GACACCGCCG TGCACCACGC CCTCACCCGT
TCTCGCAAAG GCCTGGCCAA CGCCCGCGCG CAAACCATGA TGCCGCTGAT CCGCAACGTA
CTGTTCGTGG CGATCTTCAT CATCGCCCTG ATCGTCGCCC TGGCGAACAT GGGCATGAAC
GTCACGCCCC TGCTGGCCGG TGCCGGCGTG ATCGGCCTGG CGATCGGCTT CGGTGCGCAA
TCGCTGGTGG CCGACCTGAT CACCGGCCTG TTCATCATCA TCGAAGACTC TTTGGCCATC
GACGACTACG TCGACGTCGG CGGGCACCTG GGCACCGTCG AAGGCCTGAC CATCCGCACC
GTACGCCTGC GGGACATCGA CGGCATCGTC CACACCATCC CGTTCAGCGA AATCAAAAGC
ATAAAAAACT ACTCCCGCGA ATTCGGCTAC GCCATCTTCC GCGTCGCCGT GCCGTTCAAC
ATGAGCATCG ACGAAGCCAT CAAACTGATG CGCGACGTCG GCCAGAAAAT GCGCACAGAT
CCACTGCAGC GGCGCAACAT CTGGTCACCG CTGGAATTTC AGGGCGTGGA AAGTTTCGAG
TCCGGCAACG CGATATTGCG TGCAAGATTC AAGACCGCAC CGATCAAACA ATGGGAAGTT
TCACGGGCAT TCAACCTGTC GCTGAAACGG CATCTGGACG AGGCCGGACT GGACTTGGCG
ACGCCAAGGA TGAATGTGCA AGTGATCACC GCAGGCGGTG GTGGCCAAAC TCAAGAATAG
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| Protein sequence | MFARLFALPC LFLVCLMTLT SPAPADAAGL PGLLTGSGKA QPEAQEPLGQ SLDEVIKSLE
NDKQRAQLLT DLKKLRDATK KAQATPEEGV LGLIGGTLAT FEKQFSGADS PLNRWSAEFD
MAQDELKGLM LPASEWLPII FAFAVILAVW SLLAAALIWL GHRVRMRFGL TEELPQHPRA
LDMLRFALRK LGPWMIALVI TVYMSYALPS SLGKSLAMVL AYALVVGTCF SAICVIAFSV
LDGPHRHRAL YILRHQAFRP LWLIGSFAAF GEALSDPRLV AGLGVHLAHT AATVANVLAA
LSTGLFILRF RRPIAHLIRN QPLSRRLTRR ALSDTIEILG TFWYVPALVL VGISLFATFV
SAGDTSTALR QSLICTVLLV LCMVINGLVR RHALKPQRGP KRHALYSERL KSFFYTLAHL
LVWLAFIELG LRVWGMSLIG FTEGEGHDVS VKLFSLIGTL IFAWLVWILS DTAVHHALTR
SRKGLANARA QTMMPLIRNV LFVAIFIIAL IVALANMGMN VTPLLAGAGV IGLAIGFGAQ
SLVADLITGL FIIIEDSLAI DDYVDVGGHL GTVEGLTIRT VRLRDIDGIV HTIPFSEIKS
IKNYSREFGY AIFRVAVPFN MSIDEAIKLM RDVGQKMRTD PLQRRNIWSP LEFQGVESFE
SGNAILRARF KTAPIKQWEV SRAFNLSLKR HLDEAGLDLA TPRMNVQVIT AGGGGQTQE
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