Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1687 |
Symbol | |
ID | 3716658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1883599 |
End bp | 1884312 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | GntR family transcriptional regulator |
Protein accession | YP_347419 |
Protein GI | 77457914 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.282091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGATG AGGCAACAAA AGCGGTGACA GCCATTGGCC AGATTCTTCA GGAACAACTC GACCATGGGT TGCTCGCAGC GGGGAGCAAA CTGCCAGCGG AGCGCAAGCT CAGCGAGTTG TTCGGCACGA CCCGGATTAC GGTGCGTGAA GCCTTGTTGC AGCTGGAGGC GCAAGGGCAG ATTTATCGCG AGGAGCGTCG GGGCTGGTTC GTGTCGCCGC CGCGTCTGGC CTACAACCTG ATGCAGCGCA GTCACTTTCA CGCGATGGTC AGTGCGCAGG GGCGGGTGCC GTCGACCGAG GTGATTTCGG CGCGGTTGCA GCCGGCTTCA GCGGCGGTCT GTGCGTGGTT GCAGTTGCCG GCGTTGTCGA GCGTGATTCA GATTTGCCGG TCGCGGCGGA TCGATGGGCG GCTGGTGTTG TATGTGGAGC ATTATCTGAA TCCGCAGTTT TTTCCGGGGA TTCTCGAGTT TGATCTGAAT CAGTCGATTA CCGAGCTGTA TGCGCGGCAT TACGATTTGC ACTATGGGCG GGTGCGGTTC GAGATTGTGC CTACGTCTTT ATCGGTCGAT GCGGCGGCGG CGTTGCGGGT GTCGGTGGGG AGTCCGGGGT TGAGGATTGC TCGGGTTAAT TATGATCAGT TTGGGCGGTT GATTGATTGT GATCTGGAGT TTTGGCGGCA TGATGCGATT CACGTGGGGG TTGATGTGGT TTGA
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Protein sequence | MRDEATKAVT AIGQILQEQL DHGLLAAGSK LPAERKLSEL FGTTRITVRE ALLQLEAQGQ IYREERRGWF VSPPRLAYNL MQRSHFHAMV SAQGRVPSTE VISARLQPAS AAVCAWLQLP ALSSVIQICR SRRIDGRLVL YVEHYLNPQF FPGILEFDLN QSITELYARH YDLHYGRVRF EIVPTSLSVD AAAALRVSVG SPGLRIARVN YDQFGRLIDC DLEFWRHDAI HVGVDVV
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