Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1654 |
Symbol | |
ID | 3716788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1843117 |
End bp | 1843677 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | glutathione peroxidase |
Protein accession | YP_347386 |
Protein GI | 77457881 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.323621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0047837 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCAAGC GCTGGTGTGC TGTTCCCGCG TTGCTGATGG CGTTGACCGG ACTGGCTCAG GCCGCGGATT GTCCGGATCT GTTGCAAGGT TCGTTGCCCA AGTTGCGGGC CAAGGAATCC ATCGACCTGT GTCAGCGTTA CGCCGACAAA CCGCTGGTAG TGATCAACAC GGCCAGCTTC TGTGGTTTCG CGCCGCAGTT CGAGGGGCTG GAGGCGCTCA ATCAGCGCTA CAAGGCCCAG GGCCTGGAAA TGCTCGGCGT ACCGTCCAAT GACTTCAAGC AGGAGTCCAA GGACAGCGCC GAGACCGCCA AGGTCTGCTA CGCCAACTAC GGCGTGACGT TCACCATGAC CGAGCCGCAG AAGGTTCGGG GTGACGATGC GACTCACTTG TTCCAGGTGC TGGCCAGGCA GAGCAGCGCG CCGAAGTGGA ATTTCTACAA GTACGTCATC GACCGCCAGG GCAAGGTGAT TGCCAACTTC TCCAGCCTGA CCAAACCGGA TGATCCGGAA TTTCTGGCAG CCATCGAGAA AGCCATTGCC TCCCAGTCGC TGAAACCCTG A
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Protein sequence | MLKRWCAVPA LLMALTGLAQ AADCPDLLQG SLPKLRAKES IDLCQRYADK PLVVINTASF CGFAPQFEGL EALNQRYKAQ GLEMLGVPSN DFKQESKDSA ETAKVCYANY GVTFTMTEPQ KVRGDDATHL FQVLARQSSA PKWNFYKYVI DRQGKVIANF SSLTKPDDPE FLAAIEKAIA SQSLKP
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