Gene Pfl01_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1621 
Symbol 
ID3716833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1813459 
End bp1813860 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347353 
Protein GI77457848 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.183989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.047816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTC CGTTCTGGTG TGTGTTTATC AGTGCATTGT TGATCTACGT GGCGCGCATG 
CCGGTCGGCA GGGCCATGAA AGAGCAGGGC GGTTACAACA ACCACTTGCC GCGTCAGCAG
CAGGCGCAAC TCACCGGTTA TGGGGCCCGG GCGCTGGCGG CCCACCAGAA CAGCATCGAA
GCGTTCATCC TGTTCGCCGT TGGCGTGCTG ATGGCACACA CCACGCAGAC GGCGGGATGG
CTGATCGATA CACTGGCGAT CATCTTTGTG ATCTCACGGA TTTTCTATCT GTGGTTCTAC
CTGGCGGATA TTCCCAAGCT GCGCAGTCTG GTCTGGCTGG TCGGCTTAGT GTGTTCATTG
TTGCTGATGA TTAGTCCGAC TTTTAGAACC GTCTTGCTCT AA
 
Protein sequence
MSIPFWCVFI SALLIYVARM PVGRAMKEQG GYNNHLPRQQ QAQLTGYGAR ALAAHQNSIE 
AFILFAVGVL MAHTTQTAGW LIDTLAIIFV ISRIFYLWFY LADIPKLRSL VWLVGLVCSL
LLMISPTFRT VLL