| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1618 |
|---|
| Symbol | |
|---|
| ID | 3716830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1810044 |
|---|
| End bp | 1810928 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | succinyl-CoA synthetase subunit alpha |
|---|
| Protein accession | YP_347350 |
|---|
| Protein GI | 77457845 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.161145 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.222045 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCC TGATCAATAA AGACACCAAA GTAATCTGCC AGGGCTTCAC CGGTGCGCAG
GGTACTTTCC ACTCCGAACA AGCCATTGCC TACGGCACCA AAATGGTTGG CGGCGTGACG
CCAGGCAAAG GTGGCACCAC TCACCTGAAC CTGCCTGTGT TCAACACTGT GAAAGAAGCT
GTAGAAGCCA CTGGCGCCAC CGCCAGCGTA ATCTACGTTC CGGCTCCTTT CTGCAAGGAC
TCGATCCTGG AAGCAGCTTT CGGCGGCATC AAGCTGATCG TCTGCATCAC CGAAGGCATT
CCTACCCTGG ATATGCTTGA CGCCAAAGTT AAGTGCGACG AGCTGGGTGT TACCCTGATC
GGCCCTAACT GCCCAGGCGT GATCACCCCA GGCGAATGCA AGATCGGCAT CATGCCAGGT
CACATTCACT TGCCAGGCAA GGTCGGTATC GTTTCCCGTT CCGGCACCCT GACCTACGAA
GCTGTGAAGC AGACCACTGA CGCCGGTTTC GGTCAGTCGA CTTGCGTCGG CATCGGTGGT
GACCCGATCC CGGGTTCGAA CTTCATCGAC ATCCTGAAGC TGTTCCAGGA AGACCCGAAG
ACCGAAGCGA TCGTCATGAT CGGCGAGATC GGCGGTTCGG CTGAAGAAGA AGCGGCTGCC
TACATCAAGG CCAACGTGAC CAAGCCGGTT GTTTCCTACA TCGCTGGTGT GACTGCTCCT
CCGGGCAAGC GCATGGGCCA TGCTGGCGCA ATCATCTCCG GCGGCAAAGG CACTGCAGAC
GAGAAATTCG CTGCTCTGCA AGACGCAGGC GTGAAAACCG TGCGTTCGCT GGCAGACATC
GGCAAGGCCC TGGCCGAGCT GACTGGCTGG GAAGTGAAGA AGTAA
|
|---|
| Protein sequence | MSVLINKDTK VICQGFTGAQ GTFHSEQAIA YGTKMVGGVT PGKGGTTHLN LPVFNTVKEA
VEATGATASV IYVPAPFCKD SILEAAFGGI KLIVCITEGI PTLDMLDAKV KCDELGVTLI
GPNCPGVITP GECKIGIMPG HIHLPGKVGI VSRSGTLTYE AVKQTTDAGF GQSTCVGIGG
DPIPGSNFID ILKLFQEDPK TEAIVMIGEI GGSAEEEAAA YIKANVTKPV VSYIAGVTAP
PGKRMGHAGA IISGGKGTAD EKFAALQDAG VKTVRSLADI GKALAELTGW EVKK
|
|---|
| |