| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1509 |
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| Symbol | |
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| ID | 3717109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 1692501 |
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| End bp | 1697387 |
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| Gene Length | 4887 bp |
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| Protein Length | 1628 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | hemolysin-type calcium-binding region |
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| Protein accession | YP_347241 |
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| Protein GI | 77457736 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.180172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTAA TCAACGGGAC AAACGGCGCG GATACGCTGA ACGGTACGAG TGGGGATGAT
GAGATCAATG GCCTGGGTGG CAATGATGTG ATTATCGGGA GTGCCGGGGC TGACAAAATT
GACGGTGGCG CGGGTTTCGA CACGGTCGAT TACTCGGCTT CGTTCGCCGG GGTCAATGTC
GATATTCGTC CGGGCACCGG GTTGCCTGGC ACCGGTGGTG ATGCGCAAGG CGACACGCTG
ATCGGCATTG AAAAGGTCAT CGGTTCGGCG TTCAACGATA CCTTCACCAC TGATGCTTAT
CTGTACGCCA CTTACGAAGG CGGTGCAGGC GATGACATCT ACTTCGTCAA CGGCGGTGGC
GTGACCGTCA TCGAGCAGGC CGGTGGCGGC AACGATGAGG TACGCGTCAC CTACAAAGAG
CACACGCTGG CGGCCAACGT CGAGCGTCTG ACCTACGTTG GCACCGAGTC GTTTACCGGT
GCGGGCAATG CCAGCGACAA CATCATCACT GGCGGCAACG GCAATGACAC GCTGCTGGGC
GGTGGCGGGG CTGATCAGTT CTTCGGTGGT GCGGGCATGG ACACGGTGTC CTATGACGAC
AGCACCGTAG GCGTCACGCT CAACCTGAAA ACCGGTGTCA ATTCCGGAAT CGGTGCGGGC
GATGTCTACA ACGACATCGA AGCAATCACC GGCTCCAAAT ACAACGACAC CTTCATCGCC
GATGGCCGGG TGTTTGCCTT CAACGGGGGG GCGGGCACCG ACACGGTCGA CTATTCAACC
TCGGCCGAAG CCATCAACGT TGATGTTCGT CCGGGTATCG GTCTGGCAGG CACCGGTGGC
GATGCGCAGG GCGATACCCT GGCCAGCATC GAAAAAGTCA TCGGTTCGGC CTTCAACGAC
ACGTTCACCG CAGCCCCTCT CAGCACCGTG ACCTTCGAGG GCGGCGCCGG CGATGACATC
TACTTCGTCA ACGGCGGTGG CGTGACCGTC ATCGAGCAGG CCGGTGGCGG CAACGATGAG
GTACGCGTCA CCTACAAAGA GCACACACTG GCGGCCAACG TCGAGCGTCT GACCTACGTT
GGCACCGAGT CGTTTACCGG TGCGGGCAAT GCCAGCGACA ACATCATCAC TGGCGGCAAC
GGCAATGACA CGCTGCTGGG CGGTGGCGGG GCTGATCAGT TCTTCGGTGG TGCGGGCATG
GACACGGTGT CCTATGACGA CAGCACCGTA GGCGTCACGC TCAACCTGAA AACCGGTGTC
AATTCCGGAA TCGGTGCGGG CGATGTCTAC AACGACATCG AGGCAATCAC TGGCTCCAAA
TATAACGACA CCTTCATCGC CGATGGCCGG GTGTTTGCCT TCAACGGGGG GACGGGCACC
GACACGGTCG ACTATTCAAC CTCGGCCGAA GCCATCAACG TTGATGTTCG TCCGGGTATC
GGTCTGGCAG GCACCGGTGG CGATGCGCAG GGCGATACCC TGGCCAGCAT CGAAAAAGTC
ATCGGTTCGG CCTTCAACGA CACGTTCACC GCAGCCCCTC TCAGCACCGT GACCTTCGAG
GGCGGCGCCG GCGATGACAT CTACTTCGTC AACGGCGGTG GCGTGACTGT CATCGAGCAG
GCCGGTGGCG GCAACGATGA GGTACGCGTC ACCTACAAAG AGCACACGCT GGCGGCCAAC
GTCGAGCGTC TGACCTACGT TGGCACCGAG TCGTTTACCG GTGCGGGCAA TGCCAGCGAC
AACATCATCA CTGGCGGCAA CGGCAATGAC ACGCTGCTGG GCGGTGGCGG GGCTGATCAG
TTCTTCGGTG GTGCGGGCAT GGACACGGTG TCCTATGACG ACAGCACCGT AGGCGTCACG
CTCAACCTGA AAACCGGTGT CAATTCCGGA ATCGGTGCGG GCGATGTCTA CAACGACATC
GAAGCAATCA CTGGCTCCAA ATATAACGAC ACCTTCATCG CCGATGGCCG GGTGTTTGCC
TTCAACGGGG GGACGGGCAC CGACACGGTC GACTATTCAA CCTCGGCCGA AGCCATCAAC
GTTGATGTTC GTCCGGGTAT CGGTCTGGCA GGCACCGGTG GCGATGCGCA GGGCGATACC
CTGGCCAGCA TCGAAAAAGT CATCGGTTCG GCCTTCAACG ACACGTTCAC CGCAGCCCCT
CTCAGCACCG TGACCTTCGA GGGCGGCGCC GGCGATGACA TCTACTTCGT CAACGGCGGT
GGCGTGACCG TCATCGAGCA GGCCGGTGGC GGCAACGATG AGGTACGCGT CACCTACAAA
GAGCACACGC TGGCGGCCAA CGTCGAGCGT CTGACCTTCA CCGGCACCGG CTCGTTTACC
GGCGCGGGCA ACGACAGCGA CAACATCATC ACCGGCGGCG CGAGCAACGA CATCCTCAAG
GGCGGCGGCG GTGCCGACCA GTTCTTCGGT GGGGCAGGCA TGGACACCGC GTCCTACGAC
GACAGCACCG TCGGCGTCAC GCTTGATCTG AAGACCGGAA TCAACAGCGG AATCGCTGCG
GGCGATGTCT ATAACAGCAT CGAAGCGATT GCCGGCTCGA AGTACAACGA CACGTTCTTT
GCTGACAGCC GAGTGTTTGC TTTCGACGGT GGCACTGGCT TCGATACGGT CGACTATTCA
ACCTCGGCCG AAGCCATCAA CGTTGATGTT CGTCCGGGTA TCGGTCTGGC AGGCACCGGT
GGCGATGCGC AGGGCGATAC CCTGTCCAGC ATCGAAAAAG TCATCGGTTC GGCCTTCAAC
GACACGTTCA CCGCAGCCCC TCTCAGCACC GTGACCTTCG AGGGCGGCGC CGGCGATGAC
ATCTACTTCG TCAACGGCGG TGGCGTGACC GTCATCGAGC AGGCCGGTGG CGGCAACGAT
GAGGTACGCG TCACCTACAA AGAGCACACG CTGGCGGCCA ACGTCGAGCG TCTGACCTTC
ACCGGCACCG GCTCGTTTAC CGGCGCGGGC AACGACAGCG ACAACATCAT CACCGGCGGC
GCGAGCAACG ACATCCTCAA GGGCGGCGGC GGTGCCGACC AGTTCTTCGG TGGGGCAGGC
ATGGACACCG CGTCCTACGA CGACAGCACC GTCGGCGTCA CGCTTGATCT GAAGACCGGA
ATCAACAGCG GAATCGCTGC GGGCGATGTC TATAACAGCA TCGAAGCGAT TGCCGGCTCG
AAGTACAACG ACACGTTCTT TGCTGACAGC CGAGTGTTTG CTTTCGACGG TGGCACTGGC
TTCGATACGG TCGACTATTC AACCTCAGCC GAGGCCGTCA ATGTCGAGAT TCGTCCGGGC
ACCAGCTTGG CGGGAACCGG TGGCGATGCG CAGGGCGATA CCCTGACCAA CATCGAAAAA
GTCGTCGGCT CGGCCTTCAA CGACACCTTC ACCGCCGCGG CTATCAGCTA CGCGACTTTC
GAGGGCGGTG CCGGTGATGA CATCTACTAC GTCAACGGCG GTGGCGTAAC GATCATCGAA
CAGGCGGGTG GTGGTAACGA CGAAATTCGC GTCAGCTGGA ATACCCACAC GATGGCAGCC
AATGTCGAGC GCATGACCTA CACCGGGACC GTTGCGTTTA CCGGTTACGG GAATGCCGGC
GACAACATCA TGACCGGTGG TATCGGCAAC GATGTGCTGT ATGGCGGTGG CGGTGCCGAC
CAGTTCATCG GCGGTGCGGG CATGGACACG GTGTCCTATG ACGACAGTAC CGCAGGCGTC
AGCATCAACC TGAAAACCGG TGTCAGTACC GGGATTGCGA TGGGCGATAC TTACAACAGC
GTCGAGGCAA TGACGGGCTC GAAATTCAAC GATGTCTTCG TTGGCAGCTC TGTGGCGCTC
GCAATCAACG GGGGACTCGG CCTGGATATG GTCAGCTATG AGTCCTCGGA CAGCGCGGTC
ACCATCGACC TGAAAACCAA CGCCAACGCC GGCGATGCAG CGGGCGATAC GTTCGCCGGG
ATCGAGATTT TCCAGGGCAG TCGTTTCGCT GACACGTTCC TCGGTTCGAC CGCCAACGAC
AACTTCGTTG GCGGAGCAGG TGCCGACGTG TTCGACGGTC GTGAAGGCAT CGACACGGTG
TGGTACGCCA ACAACACCAC CGCCGTGAAT ATCAACCTGC AGACCGGCGT CAGTCAGGGT
GGCGATGCCG AAGGCGATGT ATTCATCAAT GTCGAGAGTC TGATCGGGAC AAGCTTCAAT
GACACGCTGA CCGGCAATGC TGCCGCCAAT GGTCTGGAGG GCGGTCTGGG TAACGACGTC
ATTTATGGCG GAGACGGCAA CGATGTCATC TATGGCAGCC TGTACACCCC GCTCGGACCG
TTCGCTGTGA ATGTTGCAGC GGGTGGGCCG CAGGCCGACC TTCTGTATGG CGGCAATGGC
AACGACACCA TCGTTGCAGC GCCCGATGAC CGTGGCACCC AGGCCTTTGG TGAAGCCGGC
AATGACACCA TTACCGTGGT GTATGGCATG GCTGACGGTG GTGAAGGCGA CGATCTGCTG
ACCGGCACTG GCGCCGGCTT CTCGCTGTTC GGTGGAGCGG GTGCTGACAA ATTGCTTCTG
CAGGGGCCCG GCTCGGCGTT CGGCGGCGAG GATAATGACA CCTACACCGT CAATACCTCG
AGACTGGTCA CCATTCAGGA CAATGGCACC AGTTCCGGCG ACAAGTTGAT CCTGACGAAC
ATCAGCGCTC AGCAACTGCT GCTTGATCGG GTCGGCAATG ATCTGTTCCT GCATCAGTAC
AGCGTCTTCG AAGGTCAGAC TCCGGAAGAC GGCGTGCGAC TGAAGGACTG GTTCGCCGGT
TTCAACAATA TTGAATATAT CCAGACGTCT GACGGCAAGT ACATCAACCT GCCAACCGGC
AATGACGGGT TCGCCATGTT TGGCTGA
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| Protein sequence | MAVINGTNGA DTLNGTSGDD EINGLGGNDV IIGSAGADKI DGGAGFDTVD YSASFAGVNV
DIRPGTGLPG TGGDAQGDTL IGIEKVIGSA FNDTFTTDAY LYATYEGGAG DDIYFVNGGG
VTVIEQAGGG NDEVRVTYKE HTLAANVERL TYVGTESFTG AGNASDNIIT GGNGNDTLLG
GGGADQFFGG AGMDTVSYDD STVGVTLNLK TGVNSGIGAG DVYNDIEAIT GSKYNDTFIA
DGRVFAFNGG AGTDTVDYST SAEAINVDVR PGIGLAGTGG DAQGDTLASI EKVIGSAFND
TFTAAPLSTV TFEGGAGDDI YFVNGGGVTV IEQAGGGNDE VRVTYKEHTL AANVERLTYV
GTESFTGAGN ASDNIITGGN GNDTLLGGGG ADQFFGGAGM DTVSYDDSTV GVTLNLKTGV
NSGIGAGDVY NDIEAITGSK YNDTFIADGR VFAFNGGTGT DTVDYSTSAE AINVDVRPGI
GLAGTGGDAQ GDTLASIEKV IGSAFNDTFT AAPLSTVTFE GGAGDDIYFV NGGGVTVIEQ
AGGGNDEVRV TYKEHTLAAN VERLTYVGTE SFTGAGNASD NIITGGNGND TLLGGGGADQ
FFGGAGMDTV SYDDSTVGVT LNLKTGVNSG IGAGDVYNDI EAITGSKYND TFIADGRVFA
FNGGTGTDTV DYSTSAEAIN VDVRPGIGLA GTGGDAQGDT LASIEKVIGS AFNDTFTAAP
LSTVTFEGGA GDDIYFVNGG GVTVIEQAGG GNDEVRVTYK EHTLAANVER LTFTGTGSFT
GAGNDSDNII TGGASNDILK GGGGADQFFG GAGMDTASYD DSTVGVTLDL KTGINSGIAA
GDVYNSIEAI AGSKYNDTFF ADSRVFAFDG GTGFDTVDYS TSAEAINVDV RPGIGLAGTG
GDAQGDTLSS IEKVIGSAFN DTFTAAPLST VTFEGGAGDD IYFVNGGGVT VIEQAGGGND
EVRVTYKEHT LAANVERLTF TGTGSFTGAG NDSDNIITGG ASNDILKGGG GADQFFGGAG
MDTASYDDST VGVTLDLKTG INSGIAAGDV YNSIEAIAGS KYNDTFFADS RVFAFDGGTG
FDTVDYSTSA EAVNVEIRPG TSLAGTGGDA QGDTLTNIEK VVGSAFNDTF TAAAISYATF
EGGAGDDIYY VNGGGVTIIE QAGGGNDEIR VSWNTHTMAA NVERMTYTGT VAFTGYGNAG
DNIMTGGIGN DVLYGGGGAD QFIGGAGMDT VSYDDSTAGV SINLKTGVST GIAMGDTYNS
VEAMTGSKFN DVFVGSSVAL AINGGLGLDM VSYESSDSAV TIDLKTNANA GDAAGDTFAG
IEIFQGSRFA DTFLGSTAND NFVGGAGADV FDGREGIDTV WYANNTTAVN INLQTGVSQG
GDAEGDVFIN VESLIGTSFN DTLTGNAAAN GLEGGLGNDV IYGGDGNDVI YGSLYTPLGP
FAVNVAAGGP QADLLYGGNG NDTIVAAPDD RGTQAFGEAG NDTITVVYGM ADGGEGDDLL
TGTGAGFSLF GGAGADKLLL QGPGSAFGGE DNDTYTVNTS RLVTIQDNGT SSGDKLILTN
ISAQQLLLDR VGNDLFLHQY SVFEGQTPED GVRLKDWFAG FNNIEYIQTS DGKYINLPTG
NDGFAMFG
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