Gene Pfl01_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1421 
Symbol 
ID3717177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1596582 
End bp1597703 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content61% 
IMG OID 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_347153 
Protein GI77457648 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.291979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.592261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAACG TCGTCATCAG CGGCACCGGC CTGTACACCC CGGCCAACAG CATCTCCAAC 
GAAGAGCTGG TGCAGTCTTT CAATACCTAC GTCGCCCAGT TCAATGCGGA CAACGCCGAA
GCCATCGCCA GCGGCGAAGT CCAGGCCCTG ACCGAGTCCA GCGCCGCGTT CATCGAAAAA
GCTTCCGGCA TCAAGAGCCG CTTTGTCATG GACAAGGATG GCATCCTCGA CCCTGCGCGC
ATGGCGCCAC GCCTGCCGGA GCGTTCCAAC GACGAATGGT CGGTGCTTTG CCAGATGGCC
ATCGGCGCTG CCGAACAAGC CCTGCAACGT GCCGGCAAGA CTGCCGCCGA CATCGACGGC
GTGATCGTCG CCTGCTCCAA CCTGCAGCGT GCCTACCCGG CCATCGCCAT CGAAGTCCAG
GAAGCGCTGG GCATCCAGGG TTTCGGTTTC GACATGAACG TTGCCTGCTC GTCGGCGACC
TTCGGCATCC AGCAAGCGGC CAACACCGTG CAACTGGGCC AGGCCCGGGC GATCCTGATG
GTCAACCCGG AAGTCTGCAC CGGTCACCTG AACTTCCGCG ACCGCGACAG CCACTTCATC
TTCGGTGACG CGGCCACCGC CGTGATTATC GAGCGCGCCG ATCTGGCAAC CTCCAAGCAC
CAGTTCGATG TGGTCAGCAC CAAACTGCTG ACCAAGTTCT CCAACAACAT CCGCAACAAC
TTCGGCTTCC TCAACCGCGC AGCGGAAGAG GGCATCGGCG CCCGCGACAA ACTGTTCGTG
CAGGAAGGCC GCAAGGTGTT CAAGGATGTT TGCCCGATGG TGGCCGAACT GATTGGCGAG
CATCTGGAAG AGAACAAGCT CAATGTCGGT GACGTAAAAC GCTTCTGGCT GCACCAGGCC
AACCTGAGCA TGAACCACCT GATCGTGCGC AAGCTGCTGG GCCGCGAAGC CACCGAAGAA
GAAGCCCCGG TGATTCTCGA CACCTACGCC AACACCAGCT CCGCCGGTTC CGTGATTGCG
TTCCACAAAT ATCAGGACGA TCTGGCGGCC GGTTCGCTGG CGGTGCTGAG TTCGTTCGGT
GCCGGTTACT CGATTGGTAG CGTGATTCTG CGTAAACGCT AA
 
Protein sequence
MHNVVISGTG LYTPANSISN EELVQSFNTY VAQFNADNAE AIASGEVQAL TESSAAFIEK 
ASGIKSRFVM DKDGILDPAR MAPRLPERSN DEWSVLCQMA IGAAEQALQR AGKTAADIDG
VIVACSNLQR AYPAIAIEVQ EALGIQGFGF DMNVACSSAT FGIQQAANTV QLGQARAILM
VNPEVCTGHL NFRDRDSHFI FGDAATAVII ERADLATSKH QFDVVSTKLL TKFSNNIRNN
FGFLNRAAEE GIGARDKLFV QEGRKVFKDV CPMVAELIGE HLEENKLNVG DVKRFWLHQA
NLSMNHLIVR KLLGREATEE EAPVILDTYA NTSSAGSVIA FHKYQDDLAA GSLAVLSSFG
AGYSIGSVIL RKR