| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1420 |
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| Symbol | |
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| ID | 3717176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 1592406 |
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| End bp | 1596317 |
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| Gene Length | 3912 bp |
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| Protein Length | 1303 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_347152 |
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| Protein GI | 77457647 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.170977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.854242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG AATCGCCCTC CATCGACAAA CTGCTGAAAA ACCTCGATCA CGCCATGCTC
GCCGACCGCC ACCGGCTGCG GCGACAGTTG CTTGAGCTGC GCAAGAAACC CGACGAGGCC
AAGCTGGCCC AGTGGGTGGC GCGGATGCAG GCGTCCTGCG ATCAGGTGCT GGCACGCAAG
GCCAGCCTGC CGGTGATCCG TTACGACGAC AGCCTGCCGA TTGCGGCCAA GCGTGACGAA
ATCAAGAAGG CCCTGGAAAA GCACCAGGTG CTGATCATCG CGGGTGAAAC CGGCTCGGGT
AAAACCACCC AGTTGCCGAA AATCTGTCTG GAGATCGGTC GCGGCCAGCA TGGTCTGATC
GGCCACACCC AGCCTCGGCG AATTGCCGCG CGCAGCGTGG CCAGTCGGGT TGCCGAAGAA
CTCGGCACGC CGCTGGGTGC ACTGGTCGGC TATCAGGTTC GATTCGAGGA TCAGAGCGAT
TCCAATACGC TGATCAAACT GATGACCGAC GGCATCCTGC TGGCGGAAAC CCAGAACGAC
CGGTACCTCG AGCGCTACGA CACGATCATC GTCGACGAAG CCCACGAACG CAGCCTCAAC
ATCGACTTCC TGCTCGGTTA CCTGAAAACC CTGCTGCCGC GTCGTCCGGA CCTGAAAGTC
ATCATCACGT CGGCGACCAT CGATCTGGAG CGTTTCTCCA AGCATTTCGA TGACGCGCCG
ATTGTCGAGG TTTCCGGCCG TACCTTCCCG GTGGAAACCT GGTATCGCCC GCTGACGCTT
GAGCAGGACG AAGAGGGCAA CCGTGTCGAA GACGACCTGA CCGTGGATCA GGCGATCCTC
GCCACCCTCG ACGAAATCGC CGCCTATGAG CGCAGCGAAC GGCGCAGTCC TGGTGACGTG
CTGGTGTTCC TGCCGGGCGA GCGTGAGATC CGCGACGCCG CCGACATGCT GCGCAAGGCC
CAGCTCAAAC ACACCGAAAT CCTGCCGTTG TACGCGCGCC TGTCGCCGGC TGAACAGCAG
CGGATTTTCC AGTCGCATCC GGGCCGTCGC GTGGTGCTGG CAACCAACGT CGCCGAAACC
TCGCTGACCG TGCCGGGCAT CCGTTACGTG ATCGACAGCG GCACCGCGCG CATCAGTCGC
TACAGCTACC GCGCCAAGGT CCAGCGGTTG CCGATCGAAG CGATTTCCCA GGCCAGCGCC
AACCAGCGTA AAGGTCGCTG CGGTCGGGTC GAGCCGGGTA TCTGCGTGCG CTTGTACAGC
GAGGAGGATT TCCTCGGTCG CCCGGAATTT ACCGATCCGG AAATCCTGCG CACCAACCTC
GCGGCGGTGA TTCTGCAGAT GCTCCATCTG CGCCTTGGCG AGATCACTGA TTTCCCGTTT
ATCGAGCCGC CGGACGGCAA GGCGATCAGC GACGGTTTCA ACCTGCTGCA AGAACTCTCG
GCAGTGGATC GCAACAGTCA GCTGACCCCG CTCGGCCGCC AGTTGGCGCG CCTGCCGGTG
GATCCGCGCA TGGGCCGCAT GCTGCTGGAA GCGGCGAAGC TCGGCAGCCT GCAGGAAGTG
CTGATCGTCG CCAGCGCCAT GTCGATTCAG GACCCGCGCG AGCGTCCGCC GGAGCGTCAG
CAAGCCGCTG ACCAGGCCCA CGCGCAGTGG AAGGACGCCG ATTCGGACTT CGCTGCGCTG
GTCAATCTGT GGCGTGGCTT CGAAGAACAG CGCCAAGCGT TGACCGCCAG TCCGCTGCGC
AACTGGTGCC GGAAGAATTT CCTCAATTAT CTGCGCCTGC GCGAGTGGCG CGATTCCCAT
CGCCAGTTGA GTCTGATCTG CCGCGACTTG CAGCTGAGCC TCAATAAAGA GCCGGCGGAT
TATCCGAAGC TGCACAAAGC GGTGATGGTC GGCTTGCTCA GTCAGATCGG CCAGAAAACC
GAGGACGGCG ATTACCTTGG CGCCCGTCAG CGGCGGTTCT GGATTCACCC GTCTTCGGGC
ATCGGCAAGA AGCGCCCGCA GTGGGTGATG ACCGCCGAAC TGGTGGAAAC CACCAAGCTT
TACGCGCGGA TGGTGGCGAA GATCGACGCC GACTGGATCG AGCCGCTGGC CGGGCACTTG
ATCAAGAAGA ACCACTTCGA ACCGCACTGG GAGAAGAAGC GCGGCCAGGT CGTGGCGTTC
GAGCAGATCA CCCTGTTCGG TCTGATCGTG GTCGGTCGCC GACCGGTGCA CTACGGCCCG
GTGGATCCTG TGGTTTCGCG GGAGCTGTTC ATCCGCGAAG GTCTGGTGCG GGGCGAGATT
CAGTCCCGGG CCAAGTGCCT GACCGCCAAC AAGCAATTGC TCGAACAGCT CGACGAACTG
GAAGCCAAGG CCCGTCGCCG GGACATTCTG GCCGACGAAG AAACGCTCTA CGCGTTCTAC
GACGCGCGAC TGCCGGCGGA GATTCACCAG ACGGCGACGT TCGATAGTTG GTATAGGGTC
AACAGCCAGA AAGATCCGCA ACTGCTGATC ATGCGCGAGG AAGACGTGCT GGCCCGCGAA
GCCAGCGAAG TCACCGCGCA GCATTACCCG GACACGCTGC ACATCGGCGA TCTGGAACTG
GCCCTGAGTT ATCACTTCGA ACCGAATCAC CCGCGCGACG GTGTGACCCT GCGAGTGCCG
GCGCCGCTGT TGCCGATGCT GCCGCCGGAG CGCCTGGAGT GGCTGGTGCC GGGGCTGATC
GAGGCCAAGT GCATTGCGCT GGTGCGCAAC CTGCCCAAGG CCCTGCGCAA GAACTTCGTG
CCGGTGCCGG ACTTCATCAA GGCCGCGCTG CAACGCATGA CGTTTGCCGA AGGTTCGTTG
CCGCAAGCGC TGGGCCGCGA ACTGCTGCGC ATGACCGGCG CGCGGGTCAG CGATGAAGCC
TGGGCCGAAG CGGCGCAGCA GGTTGAAAGC CACCTGCGGA TGAACCTGGA AATCGTCGAC
GGCCAGGGCA AGTTCCTCGG CGAAGGCCGG GATCTGGCCG AGCTGACCGC ACGTTTCGCC
GAAGCCAGCC AGGCCGCGTT GGCCGTGCCG CAAAGTGCGA AGAGCCAGCA ACCGGTGGAG
GCCAAGGTCT TCGCGCCGGT GGCGGAAAAG ACTCAGCAGA AGATCGCCGG GCTGTCGATG
ACGGTCTATC CGGCGCTGGT GGAAGAGGGC GGCACGGTCA AGGAAGGTCG TTTCTCGACA
CCGGCCGAGG CCGAATTTCA GCACCGCCGC GCCTTGCAAC GCCTGCTGAT GCAGCAACTG
GCCGAACCGG CCAAGTTCCT GCGCGGCAAG TTGCCGGGCC TGACCGAAAT GGGCCTGCTG
TACCGCGAAC TGGGCCGCGT CGATGCGTTG GTGGAAGACA TTCTGCTGGC CAGCCTCGAC
AGCTGCATTC TCGACGGCGA AGACCCGTTG CCGCGTGACG GCGCAGGGCT GGCGGCACTG
GCCGAGCGCA AGCGCGGCAG CTGGACCGAG CACGCCGAGC GCGTGGCACG CCTGACGCTG
GAAATCCTCA AGCTCTGGCA CGGTCTGCAA AAACGCTTCA AGGGCAAGAT CGATCTGGCT
CAGGCCGTGG CGCTCAACGA CATCAAGCAG CAGCTCAGCC ATCTGGTGTA TCCGGGCTTC
GTCAGGGAAA CGCCGATGCT CTGGTTCAAG GAGTTACCGC GCTACCTGAA AGCGGTCGAG
CAGCGTTTCG AGAAGCTGGG CGCGCAGGTG CAGAAGGATC GGGTCTGGAG CGGCGAACTT
GCCGGCCTTT GGACGCAATA CCAGACCCGC GCCGCCAAAC ATGCTCAGGA AGGCAAACGC
GATCCGCAGC TCGAGCTGTA TCGCTGGTGG CTGGAGGAGT ATCGGGTTTC GCTGTTCGCC
CAGCAGTTGG GCACGAAAGT GCCGATCTCC GACAAGCGCC TGAACAAACA ATGGACGCAG
GTCGAGGCAT GA
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| Protein sequence | MTDESPSIDK LLKNLDHAML ADRHRLRRQL LELRKKPDEA KLAQWVARMQ ASCDQVLARK
ASLPVIRYDD SLPIAAKRDE IKKALEKHQV LIIAGETGSG KTTQLPKICL EIGRGQHGLI
GHTQPRRIAA RSVASRVAEE LGTPLGALVG YQVRFEDQSD SNTLIKLMTD GILLAETQND
RYLERYDTII VDEAHERSLN IDFLLGYLKT LLPRRPDLKV IITSATIDLE RFSKHFDDAP
IVEVSGRTFP VETWYRPLTL EQDEEGNRVE DDLTVDQAIL ATLDEIAAYE RSERRSPGDV
LVFLPGEREI RDAADMLRKA QLKHTEILPL YARLSPAEQQ RIFQSHPGRR VVLATNVAET
SLTVPGIRYV IDSGTARISR YSYRAKVQRL PIEAISQASA NQRKGRCGRV EPGICVRLYS
EEDFLGRPEF TDPEILRTNL AAVILQMLHL RLGEITDFPF IEPPDGKAIS DGFNLLQELS
AVDRNSQLTP LGRQLARLPV DPRMGRMLLE AAKLGSLQEV LIVASAMSIQ DPRERPPERQ
QAADQAHAQW KDADSDFAAL VNLWRGFEEQ RQALTASPLR NWCRKNFLNY LRLREWRDSH
RQLSLICRDL QLSLNKEPAD YPKLHKAVMV GLLSQIGQKT EDGDYLGARQ RRFWIHPSSG
IGKKRPQWVM TAELVETTKL YARMVAKIDA DWIEPLAGHL IKKNHFEPHW EKKRGQVVAF
EQITLFGLIV VGRRPVHYGP VDPVVSRELF IREGLVRGEI QSRAKCLTAN KQLLEQLDEL
EAKARRRDIL ADEETLYAFY DARLPAEIHQ TATFDSWYRV NSQKDPQLLI MREEDVLARE
ASEVTAQHYP DTLHIGDLEL ALSYHFEPNH PRDGVTLRVP APLLPMLPPE RLEWLVPGLI
EAKCIALVRN LPKALRKNFV PVPDFIKAAL QRMTFAEGSL PQALGRELLR MTGARVSDEA
WAEAAQQVES HLRMNLEIVD GQGKFLGEGR DLAELTARFA EASQAALAVP QSAKSQQPVE
AKVFAPVAEK TQQKIAGLSM TVYPALVEEG GTVKEGRFST PAEAEFQHRR ALQRLLMQQL
AEPAKFLRGK LPGLTEMGLL YRELGRVDAL VEDILLASLD SCILDGEDPL PRDGAGLAAL
AERKRGSWTE HAERVARLTL EILKLWHGLQ KRFKGKIDLA QAVALNDIKQ QLSHLVYPGF
VRETPMLWFK ELPRYLKAVE QRFEKLGAQV QKDRVWSGEL AGLWTQYQTR AAKHAQEGKR
DPQLELYRWW LEEYRVSLFA QQLGTKVPIS DKRLNKQWTQ VEA
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