| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1402 |
|---|
| Symbol | |
|---|
| ID | 3717197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1573660 |
|---|
| End bp | 1574202 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_347134 |
|---|
| Protein GI | 77457629 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.156265 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCTCA GTTATCTACG GCTGGTGTTG TTTGCGGCGG GCCTGTTGAT CGGTGTCCAG
GTGCCGGGCT TCATCAACGA TTACGCCAAG CGGGTCGAAG CGCACCTGAT CGAGGCGCAG
ACCGGTCTGC GCGGCTTCCA GGGCACCGCC GAGCAGTTCT TCAAAGGGGA TATCCAGGCG
CTGGTCGCCC ATTACCGTGC CAGCGAAGAT CCGGTGTTTC GCAGCGATGC CGACAGCTTG
AGCACTTTGC TCAACCGTCA GCTGGCGCTG GACAAGCAAT TCCAGGCGAT GCAGGGCCCG
TGGTACATCC GCTTCCTGCA GGTGGTGCTG GCCGCCGATC CGGACATCCG CAAGGAAACC
TGGAATGGCT ACAGCTACCA GATCCTGCTG ACGCCTGAGG CGATGATCTG GGGCATGAGC
GGCGCGATGT TGCTGTCGTT CGGCCTTGAA TGCCTGTTCC GTCTGATCGA CTGGGTGGTG
CTGGGCGGCA AGCGCCTGCG CCAGAGCCGG CCGATCGAAG ACCGGGATGT GCGAGGGCTG
TAA
|
|---|
| Protein sequence | MLLSYLRLVL FAAGLLIGVQ VPGFINDYAK RVEAHLIEAQ TGLRGFQGTA EQFFKGDIQA
LVAHYRASED PVFRSDADSL STLLNRQLAL DKQFQAMQGP WYIRFLQVVL AADPDIRKET
WNGYSYQILL TPEAMIWGMS GAMLLSFGLE CLFRLIDWVV LGGKRLRQSR PIEDRDVRGL
|
|---|
| |