Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1393 |
Symbol | |
ID | 3717226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1565889 |
End bp | 1567118 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_347125 |
Protein GI | 77457620 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.694532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGACGG GATTGCGCCG GGCGCTGATC GTCACGCTGC TGGCGCTGAG CGCGCCGGTG TGGGCGGCGA AGAAAGTCGA TCTGGATTAT CAGGTACGCC TGCTGCCGCA GAGCGATCAG GCCGAAGTGC GCCTGACCCT TGCCAAGGGC GAAGAGGTGC GCAGCCTGGA TTTTGATCTT GGCGATGGCA GCCACTACAG CGACTTCAAG GCCGACGGCC AGTGGCAACT GACACCGGGC AAACCGGCGC GCGGGGTGTG GCGCCCGACG GCGGACAAGG CCAGCCTGAC CTATCGCGTG CGCATCAGCC ACGGCCGCAA GAACGGCAGC TTCGACACGC GCATGACCCC GACCTGGGCG TTGATGCGCG GCGATGAACT GGTGCCGCCG GCCAGGCTTG ATCAGCAGGA CGGTATCGAA CTGGTCGCGC GCCTGCACTT CGAATTGCCC GACGGCTGGA AAAGCGTCGA AACCGCCTGG CCGCGCATCG GCAAGAACAA ATTCCGTATC GACAATCCGT CACGCCTGTT CGACCGCCCG ACCGGCTGGA TGCTCGCCGG CCACCTCGGC AGTCGCCGCA CCCGACTGGG GGAAACCGAA GTCACCGTGG CGTCGCCGCA AGGTCAGGGC ATGCGCCGTA TGGATGTGCT GACGCTGCTG ACGTTTGTCT GGCCGCAGGT GCAGGCGGTG TTTCCCCGCC ATCCGAGCAA ACTGCTGATC GTCGGCGCCA ATGACCCGAT GTGGCGCGGC AGTCTGGCGG CGCGGGAGTC GATCTACCTC AACACGCGGT TGCCGCTGGT CAGCGAAAGC GGCAGCAGCG CCCTGGTGCG CGAGCTGGCG CAGGTGTTCG GGCGGATCAA CGACGAGCAG CGCAGCGACT GGATCAGCGA AGGGTTTGCC GAGTATTACG CCATCGAACT GGTGCGCCGT GCCGGCGGCA TGAGTGACGA GCGTTATCAG AGCTTGCAGG CGAAACTTGC GAAGGACAGT CAGAAAGTCA CGACCCTGCG CGGCGAGCAG ATCAGCCCGG CGCAGCTGTC GAAAGCGGTG CTGTTGTTGC AGGAGCTGGA CGGCGAGATT CGCCTGAAGA CCCGAAACAA GCGGTCGTTG GATGACGTGC TGCGCGGGGC GATGCACTTG GTGACTGTCG ATACAAAAGA ATTTGTGCAA CTCGCCGAAA GCATTCTCGG CGAGTCGTCC AAAGTCCTTG ATACCGGGTT GCTCCGGTAG
|
Protein sequence | MATGLRRALI VTLLALSAPV WAAKKVDLDY QVRLLPQSDQ AEVRLTLAKG EEVRSLDFDL GDGSHYSDFK ADGQWQLTPG KPARGVWRPT ADKASLTYRV RISHGRKNGS FDTRMTPTWA LMRGDELVPP ARLDQQDGIE LVARLHFELP DGWKSVETAW PRIGKNKFRI DNPSRLFDRP TGWMLAGHLG SRRTRLGETE VTVASPQGQG MRRMDVLTLL TFVWPQVQAV FPRHPSKLLI VGANDPMWRG SLAARESIYL NTRLPLVSES GSSALVRELA QVFGRINDEQ RSDWISEGFA EYYAIELVRR AGGMSDERYQ SLQAKLAKDS QKVTTLRGEQ ISPAQLSKAV LLLQELDGEI RLKTRNKRSL DDVLRGAMHL VTVDTKEFVQ LAESILGESS KVLDTGLLR
|
| |