Gene Pfl01_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1393 
Symbol 
ID3717226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1565889 
End bp1567118 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347125 
Protein GI77457620 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.694532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGG GATTGCGCCG GGCGCTGATC GTCACGCTGC TGGCGCTGAG CGCGCCGGTG 
TGGGCGGCGA AGAAAGTCGA TCTGGATTAT CAGGTACGCC TGCTGCCGCA GAGCGATCAG
GCCGAAGTGC GCCTGACCCT TGCCAAGGGC GAAGAGGTGC GCAGCCTGGA TTTTGATCTT
GGCGATGGCA GCCACTACAG CGACTTCAAG GCCGACGGCC AGTGGCAACT GACACCGGGC
AAACCGGCGC GCGGGGTGTG GCGCCCGACG GCGGACAAGG CCAGCCTGAC CTATCGCGTG
CGCATCAGCC ACGGCCGCAA GAACGGCAGC TTCGACACGC GCATGACCCC GACCTGGGCG
TTGATGCGCG GCGATGAACT GGTGCCGCCG GCCAGGCTTG ATCAGCAGGA CGGTATCGAA
CTGGTCGCGC GCCTGCACTT CGAATTGCCC GACGGCTGGA AAAGCGTCGA AACCGCCTGG
CCGCGCATCG GCAAGAACAA ATTCCGTATC GACAATCCGT CACGCCTGTT CGACCGCCCG
ACCGGCTGGA TGCTCGCCGG CCACCTCGGC AGTCGCCGCA CCCGACTGGG GGAAACCGAA
GTCACCGTGG CGTCGCCGCA AGGTCAGGGC ATGCGCCGTA TGGATGTGCT GACGCTGCTG
ACGTTTGTCT GGCCGCAGGT GCAGGCGGTG TTTCCCCGCC ATCCGAGCAA ACTGCTGATC
GTCGGCGCCA ATGACCCGAT GTGGCGCGGC AGTCTGGCGG CGCGGGAGTC GATCTACCTC
AACACGCGGT TGCCGCTGGT CAGCGAAAGC GGCAGCAGCG CCCTGGTGCG CGAGCTGGCG
CAGGTGTTCG GGCGGATCAA CGACGAGCAG CGCAGCGACT GGATCAGCGA AGGGTTTGCC
GAGTATTACG CCATCGAACT GGTGCGCCGT GCCGGCGGCA TGAGTGACGA GCGTTATCAG
AGCTTGCAGG CGAAACTTGC GAAGGACAGT CAGAAAGTCA CGACCCTGCG CGGCGAGCAG
ATCAGCCCGG CGCAGCTGTC GAAAGCGGTG CTGTTGTTGC AGGAGCTGGA CGGCGAGATT
CGCCTGAAGA CCCGAAACAA GCGGTCGTTG GATGACGTGC TGCGCGGGGC GATGCACTTG
GTGACTGTCG ATACAAAAGA ATTTGTGCAA CTCGCCGAAA GCATTCTCGG CGAGTCGTCC
AAAGTCCTTG ATACCGGGTT GCTCCGGTAG
 
Protein sequence
MATGLRRALI VTLLALSAPV WAAKKVDLDY QVRLLPQSDQ AEVRLTLAKG EEVRSLDFDL 
GDGSHYSDFK ADGQWQLTPG KPARGVWRPT ADKASLTYRV RISHGRKNGS FDTRMTPTWA
LMRGDELVPP ARLDQQDGIE LVARLHFELP DGWKSVETAW PRIGKNKFRI DNPSRLFDRP
TGWMLAGHLG SRRTRLGETE VTVASPQGQG MRRMDVLTLL TFVWPQVQAV FPRHPSKLLI
VGANDPMWRG SLAARESIYL NTRLPLVSES GSSALVRELA QVFGRINDEQ RSDWISEGFA
EYYAIELVRR AGGMSDERYQ SLQAKLAKDS QKVTTLRGEQ ISPAQLSKAV LLLQELDGEI
RLKTRNKRSL DDVLRGAMHL VTVDTKEFVQ LAESILGESS KVLDTGLLR