| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1374 |
|---|
| Symbol | |
|---|
| ID | 3717244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1547120 |
|---|
| End bp | 1547833 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
|---|
| Protein accession | YP_347106 |
|---|
| Protein GI | 77457601 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.348784 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAC GTGAAGAACT CTACCGCGGC AAAGCCAAAT CGGTTTACAA GACCGACGAC
GCTGACCGCT TGATCCTGCT GTTTCGCAAC GACACTTCGG CGTTCGACGG CAAGCGCATC
GAGCAGCTCG ACCGCAAAGG CATGGTGAAC AACAAGTTCA ACGCCTTCAT CATGCAGAAA
CTCGAAGCGG CCGGCATTCC GACCCAATTC GACAAACTGC TGGCCGACAA CGAAGTGCTG
GTGAAAAAAC TCGACATGAT CCCGGTCGAG TGCGTCGTGC GTAACTACGC CGCCGGCAGC
CTGGTCAAGC GTCTGGGCGT CGAGGAGGGC ATGAAGCTCA ACCCGTACAC CTTCGAACTG
TTCCTGAAGG ACGACGCCAA GGGCGATCCG TTCATCAACG AATCCCACGT CGTGGCCTTC
GGCTGGGGTA CTGCCGAGCA ACTGGCGCGC ATGAAAGAAC TGTCGCTCAA GGTCAACGAA
GTCCTGAGCA AACTGTTCGA CGACGCCGGC CTGTTGCTGG TGGACTTCAA GCTTGAATTC
GGCGTGTTCA GCGACGGCTC CATCGTCCTG GGCGACGAGT TCAGCCCGGA CGGCTGCCGT
CTGTGGGACA AGGACACCAA GAAGAAGATG GACAAGGACC GCTTCCGCCA GGGCCTCGGT
GACGTCATCG AAGCCTACGA AGAAGTCGCC AACCGTCTGG GCGTACCGCT TTAA
|
|---|
| Protein sequence | MEKREELYRG KAKSVYKTDD ADRLILLFRN DTSAFDGKRI EQLDRKGMVN NKFNAFIMQK
LEAAGIPTQF DKLLADNEVL VKKLDMIPVE CVVRNYAAGS LVKRLGVEEG MKLNPYTFEL
FLKDDAKGDP FINESHVVAF GWGTAEQLAR MKELSLKVNE VLSKLFDDAG LLLVDFKLEF
GVFSDGSIVL GDEFSPDGCR LWDKDTKKKM DKDRFRQGLG DVIEAYEEVA NRLGVPL
|
|---|
| |