Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1341 |
Symbol | |
ID | 3717288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1517537 |
End bp | 1518325 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | ABC transporter-like |
Protein accession | YP_347073 |
Protein GI | 77457568 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.359238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTTCA TCACGGTGAA AAACGTCTGG CAGCAATACG CCGACCAAGT GGTGCTGGAA GGCTTGAACC TCAACGTCAA CGAGGGCGAG TTCTGCACGC TGGTCGGTGC CTCGGGCTGC GGCAAGTCGA CCTTCCTGCG CCTGCTGCTC GGTCAGGAAA CCGCCAGTCG CGGCGAGATT CTGCTCGACG GTCAGCCACT GGCGCGCGAG CCGGATGCGA GCCGTGGCGT GGTGTTCCAG CGCTACTCGG TGTTCCCGCA CCTGAGCGTG CTGGATAACG TCGCCCTCGG CCTCGAACTG CCACGGGCGC CACTGCTCGG TCGTCTGTTC GGCAGCGCCA AACGGGACGC CCGCGAACAG GCCTCGGCGC TGCTGCACAA AGTCGGCCTC GGCCATGCGC TGGACAAGTA CCCGGCGCAA CTGTCCGGCG GCATGCAACA GCGGCTGGCG ATTGCCCAGG CGCTGATCAT GAAGCCGCGC GTGTTGCTGC TCGACGAACC GTTCGGCGCG CTCGATCCGG GCATTCGCAA GGACATGCAC GCGCTGCTGC TGGAGCTGTG GCGCGAGACG CAACTGACGG TGTTCATGGT CACCCACGAC CTGTCCGAAG GTTTCAGCCT CGGCACCCGT CTGCTGGTGT TCGACAAGGT CCGCCTCGAC CCGCACGTCC CCGGCGCCTA TGGCGCCCGC ATCACCTACG ACATCCCTTT GAACAGCGAC CGCCGCGCCC AACGCGCCGC CGTCGACGCC CTGCCCGCCG AGCTGGCCGG CACGCTTCGT ATTGCCTGA
|
Protein sequence | MSFITVKNVW QQYADQVVLE GLNLNVNEGE FCTLVGASGC GKSTFLRLLL GQETASRGEI LLDGQPLARE PDASRGVVFQ RYSVFPHLSV LDNVALGLEL PRAPLLGRLF GSAKRDAREQ ASALLHKVGL GHALDKYPAQ LSGGMQQRLA IAQALIMKPR VLLLDEPFGA LDPGIRKDMH ALLLELWRET QLTVFMVTHD LSEGFSLGTR LLVFDKVRLD PHVPGAYGAR ITYDIPLNSD RRAQRAAVDA LPAELAGTLR IA
|
| |