Gene Pfl01_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1341 
Symbol 
ID3717288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1517537 
End bp1518325 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID 
ProductABC transporter-like 
Protein accessionYP_347073 
Protein GI77457568 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.359238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCA TCACGGTGAA AAACGTCTGG CAGCAATACG CCGACCAAGT GGTGCTGGAA 
GGCTTGAACC TCAACGTCAA CGAGGGCGAG TTCTGCACGC TGGTCGGTGC CTCGGGCTGC
GGCAAGTCGA CCTTCCTGCG CCTGCTGCTC GGTCAGGAAA CCGCCAGTCG CGGCGAGATT
CTGCTCGACG GTCAGCCACT GGCGCGCGAG CCGGATGCGA GCCGTGGCGT GGTGTTCCAG
CGCTACTCGG TGTTCCCGCA CCTGAGCGTG CTGGATAACG TCGCCCTCGG CCTCGAACTG
CCACGGGCGC CACTGCTCGG TCGTCTGTTC GGCAGCGCCA AACGGGACGC CCGCGAACAG
GCCTCGGCGC TGCTGCACAA AGTCGGCCTC GGCCATGCGC TGGACAAGTA CCCGGCGCAA
CTGTCCGGCG GCATGCAACA GCGGCTGGCG ATTGCCCAGG CGCTGATCAT GAAGCCGCGC
GTGTTGCTGC TCGACGAACC GTTCGGCGCG CTCGATCCGG GCATTCGCAA GGACATGCAC
GCGCTGCTGC TGGAGCTGTG GCGCGAGACG CAACTGACGG TGTTCATGGT CACCCACGAC
CTGTCCGAAG GTTTCAGCCT CGGCACCCGT CTGCTGGTGT TCGACAAGGT CCGCCTCGAC
CCGCACGTCC CCGGCGCCTA TGGCGCCCGC ATCACCTACG ACATCCCTTT GAACAGCGAC
CGCCGCGCCC AACGCGCCGC CGTCGACGCC CTGCCCGCCG AGCTGGCCGG CACGCTTCGT
ATTGCCTGA
 
Protein sequence
MSFITVKNVW QQYADQVVLE GLNLNVNEGE FCTLVGASGC GKSTFLRLLL GQETASRGEI 
LLDGQPLARE PDASRGVVFQ RYSVFPHLSV LDNVALGLEL PRAPLLGRLF GSAKRDAREQ
ASALLHKVGL GHALDKYPAQ LSGGMQQRLA IAQALIMKPR VLLLDEPFGA LDPGIRKDMH
ALLLELWRET QLTVFMVTHD LSEGFSLGTR LLVFDKVRLD PHVPGAYGAR ITYDIPLNSD
RRAQRAAVDA LPAELAGTLR IA