| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1335 |
|---|
| Symbol | |
|---|
| ID | 3717335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 1507830 |
|---|
| End bp | 1508522 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | ribosomal small subunit pseudouridine synthase A |
|---|
| Protein accession | YP_347067 |
|---|
| Protein GI | 77457562 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTCG ACCGTTTCCT GAGTAACCTG CCCCGCTACA ACCGCAAGCA GGTTCGCCTG
TTGCTGGTGG AAAAGCGCGT GCGCATTGAC GGAAAAGTCG TCAGCGATCC CCACAGCGAA
GTCCTGGAGT TCAGCCGCGT GGAGGTCGAC GACGAAGTGC TGCAACCCGG CAAACCGGCG
CGCTACTTCA TGCTGAACAA ACCGCAGGGC TGCGTCAGCG CCACCCGCGA TCCCGAGCAT
CCGACCGTGC TCGACCTGAT TCACGAGCCG GACAAGGACG ACCTGCACAT CGCCGGGCGT
CTGGATTTCA ACACCACCGG GCTGATGCTG ATCACCAACG ACGGCAGCTG GTCGCGGCGC
CTGACCCAGC CGCAGACCAA ACTGCCGAAG GTCTATTACG TCGAGACCGA ACAGGAGATC
GGCCCGGAAT ATGCGATCAA GTTCGCCGAG GGGATCTACT TCGCCTTTGA GGACCTGACC
ACCCAACCGG CGCAGCTGCA AGTGCTCGGC CCGCGAACGG CGCGGTTGAG CATCGTCGAA
GGTCGTTACC ATCAGGTGAA GCGCATGTTC GGCCACTTCA ACAACAAAGT GCTGCGCCTG
CACCGCGAAT CCATGGGCCC GCTGGCGCTG GATCACGCGC TAAAACCGGG CGAGTACCGC
GCTTTGCGCA CCGAAGAGAT TCATTTGTTC TAA
|
|---|
| Protein sequence | MRVDRFLSNL PRYNRKQVRL LLVEKRVRID GKVVSDPHSE VLEFSRVEVD DEVLQPGKPA
RYFMLNKPQG CVSATRDPEH PTVLDLIHEP DKDDLHIAGR LDFNTTGLML ITNDGSWSRR
LTQPQTKLPK VYYVETEQEI GPEYAIKFAE GIYFAFEDLT TQPAQLQVLG PRTARLSIVE
GRYHQVKRMF GHFNNKVLRL HRESMGPLAL DHALKPGEYR ALRTEEIHLF
|
|---|
| |