Gene Pfl01_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1236 
Symbol 
ID3717085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1407898 
End bp1409511 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content63% 
IMG OID 
ProductFAD dependent oxidoreductase 
Protein accessionYP_346968 
Protein GI77457463 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGAA TCACCGAACT CAAGCTGCCG ATCGACCATC CCGACGAAGA CCTGCGCGCT 
GCCATCGTGC AACGCCTGGG CATTGCCAGC GATGACCTGC TCGATTTCAC CTTGTTCAAG
CGCAGCTACG ATGCGCGCAA AAAGTCCTCC GAACTGTGCT TCATCTACAC CATCGACCTC
GAAGTGCGCG ACGAGGCCAA AGTGCTGGGC AAGTTCGCCG ACGACCGTAA CGTCAACGTG
GCGCCGGATG TCAGCTACAA ATTCGTCGGT CAGGCACCAA GCGACCTGAA CCAGCGCCCG
ATCGTGGTCG GTTTCGGCCC GTGCGGGATC TTCGCCGGCC TGCTGCTGGC ACAGATGGGC
TTCAAGCCGA TCATCCTCGA ACGCGGCACC GAAGTGCGCC AGCGCACCAA GGACACCTGG
GGCCTGTGGC GCAAAAGCGT GCTCAACCCC GAGTCCAACG TGCAGTTCGG CGAAGGCGGC
GCGGGCACGT TCTCCGACGG CAAGCTGTAC AGCCAGATCA AGGACCCGAA ATTCCTCGGC
CGTAAAGTCC TGCACGAGTT CGTCAAGGCC GGCGCGCCGG AAGAAATCCT CTACGTCAGC
AAACCGCACA TCGGTACGTT CCGTCTGACC GGCATGGTCG AGACCATGCG CGAAGAAATC
CGCGCCCTCG GCGGTGAAGT ACGCTTTCAG GAACGCGTCA CCGACGTGCT GATCGAGGAC
GGCCAACTGG TCGGCGTCGA ACTGGCCAGC GGCGAAATCC TGCACTCCAG ACACGTGATC
CTGGCGCTGG GTCACAGTGC CCGCGACACC TTCCGCATGC TCCACAGCCG TGGCGTGTTC
ATGGAAGCCA AGCCGTTCTC GGTGGGTTTC CGCATCGAGC ACCCGCAATC GCTGATCGAC
CGTGCGCGAC TGGGCAAATA CGCCGGCCAC CCCAAGTTGG GCGCCGCCGA CTACAAACTG
GTGCACCACG CCAAGAACGG CCGCTCGGTC TACAGCTTCT GCATGTGCCC GGGCGGCACC
GTGGTCGCGG CGACTTCCGA GCCGAACCGC GTGGTCACCA ACGGCATGAG CCAGTACTCG
CGTAACGAGC GCAACGCCAA CTCCGGCATC GTCGTCGGCA TCACCCCGGA AGTCGATTAT
CCGGGCGGCC CGCTGGCCGG GATCGAGTTG CAGGAACGTC TGGAGTCCCA CGCCTTCATC
CTCGGCGGCA GCGATTACAA GGCGCCGGCG CAACTGGTCG GCGACTTCAT CGCCGGCACA
CCATCCACCG CGCTGGGCGA AGTCGAGCCG TCGTACAAGC CGGGTGTGGC ATTGGGCGAT
CTGGCCCTGG CCTTGCCGGA CTTCGCCATT GAAGCCATTC GGGAAGCCTT GCCGGCGTTC
GAAAAGCAGA TTCGCGGTTA TTCGCTGCAC GATGCGGTGC TGACCGGGAT CGAGACGCGT
ACCTCGTCGC CGCTGCGCAT CACCCGAAAC GAGACGCTGC AGAGCATGAA CGTCAAAGGT
CTGTTCCCGG CCGGTGAAGG CGCGGGTTAT GCGGGCGGGA TTCTGTCGGC GGGTGTTGAC
GGGATTCGGA TTGCTGAAGC GGTGGCGCGT GACATCCTCG GTCTGAAAGA CTGA
 
Protein sequence
MLRITELKLP IDHPDEDLRA AIVQRLGIAS DDLLDFTLFK RSYDARKKSS ELCFIYTIDL 
EVRDEAKVLG KFADDRNVNV APDVSYKFVG QAPSDLNQRP IVVGFGPCGI FAGLLLAQMG
FKPIILERGT EVRQRTKDTW GLWRKSVLNP ESNVQFGEGG AGTFSDGKLY SQIKDPKFLG
RKVLHEFVKA GAPEEILYVS KPHIGTFRLT GMVETMREEI RALGGEVRFQ ERVTDVLIED
GQLVGVELAS GEILHSRHVI LALGHSARDT FRMLHSRGVF MEAKPFSVGF RIEHPQSLID
RARLGKYAGH PKLGAADYKL VHHAKNGRSV YSFCMCPGGT VVAATSEPNR VVTNGMSQYS
RNERNANSGI VVGITPEVDY PGGPLAGIEL QERLESHAFI LGGSDYKAPA QLVGDFIAGT
PSTALGEVEP SYKPGVALGD LALALPDFAI EAIREALPAF EKQIRGYSLH DAVLTGIETR
TSSPLRITRN ETLQSMNVKG LFPAGEGAGY AGGILSAGVD GIRIAEAVAR DILGLKD