Gene Pfl01_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1228 
Symbol 
ID3717077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1401022 
End bp1402116 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content63% 
IMG OID 
ProductOmpA/MotB 
Protein accessionYP_346960 
Protein GI77457455 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCCA AACAAACTCT CGCCCTGGCC CTGTGTTTCG CAATCACCGG TTGTGCACAG 
ACTCCGAAGA ACGACGCCGA TGGCGGTAGC TGGTGGCCGT TCGGTTCTTC CGACAAAGTT
GCAGCCAAGG AGCCGGCTCC GGCTCCTGCC CCATTGAAAC CGGCCGCCAC CGCGCCGGTG
GCCAAGGCTG AGAGCAGCAG TCCGTGGTAC TGGCCGTTTG GCTCGGACGA CTCGGCGGCA
GCCAAGCCAG AAGTGAAAGC TGAAGCCAAG CCCGAAGCAA AACCGGTCGA AGTCGCCAAG
GCCGAGGCCG ACAAGGGTGG CAAATGGTGG TGGCCGTTTG GCGGCAAGGA GCAGGACACG
GCCAAAGTCG TGCCGATGCC CGATCCGAAA GTGACCCAAG CGTGGCTGGA TGACTACGAA
CCGCGCCTGC GCACCGCAAT CAAGGACAGC AACCTGCAAC TCGAACGCCG TGAAAACGTG
CTGGTCGTGA CCGCGCCGGT GGAAGGCTCG TTCAACCCGG ATCGCCCGGC CATGCTGCTG
CCAGTGACCC TCGGTCCGTT CACCCGTGTG GCGAAAATCC TCGAAGCCGA CCCGAAAACC
GCCGTACTGG TGCTCGGTCA CAGTGACACC ACCGGTGCTG CGCCGGCCAA CGTCAAGTTG
AGCCAGGAAC GCGCCCAGGC TGTGGCGGCG ATCTTCCGCC TGAGCGGTCT GCAACGTGAT
CGCCTGATGC TGCGCGGCAT GGGTTCCGAA GCACCGCGTG CCGCCAACGA CAGCGTTGAA
GGCCGTGCCC TGAACCGCCG TGTAGAACTG TTGGTGACCC CGCAGAACAC CATGGTCGCG
CTGCTGAGCA AATACAACAT GCCAGCACCG AAGCCAGTGA CCATGGTCGC TGCCCAGGAC
GTCAAGCCTG CCGCCAAACC GGTGACCCCG GCGCCGGCGG CGAAGAAAGC CGCTGTACCG
GCCACCAAAA AGGCCCCGGC CAAGAAAGCC GCCGCCAAGG CTCCAGCGAA AAAGGCCCCG
GCGAAAAAGA CTGCACCCGC CAAAGCTGCC GCAACCGACA AGAAAGTCGC TGCGACCGAT
ACCACCAAAA AGTGA
 
Protein sequence
MSSKQTLALA LCFAITGCAQ TPKNDADGGS WWPFGSSDKV AAKEPAPAPA PLKPAATAPV 
AKAESSSPWY WPFGSDDSAA AKPEVKAEAK PEAKPVEVAK AEADKGGKWW WPFGGKEQDT
AKVVPMPDPK VTQAWLDDYE PRLRTAIKDS NLQLERRENV LVVTAPVEGS FNPDRPAMLL
PVTLGPFTRV AKILEADPKT AVLVLGHSDT TGAAPANVKL SQERAQAVAA IFRLSGLQRD
RLMLRGMGSE APRAANDSVE GRALNRRVEL LVTPQNTMVA LLSKYNMPAP KPVTMVAAQD
VKPAAKPVTP APAAKKAAVP ATKKAPAKKA AAKAPAKKAP AKKTAPAKAA ATDKKVAATD
TTKK