Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1209 |
Symbol | |
ID | 3717058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1380804 |
End bp | 1381532 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | amino acid ABC transporter permease |
Protein accession | YP_346941 |
Protein GI | 77457436 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.638371 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAAA CCCTCTTACA AAATCTGGGG CTCTCCGCCT TCAGCCTCAA GGGCTTTGGC CCGTTGCTGT TGGAAGGCAC CTGGATGACC ATCAAATTGT CGGCGTTGTC GCTGCTGGTG GCCGTGTTGC TCGGCCTGCT CGGCGCCAGT GCCAAGCTGT CAAAAATCAA GCTGCTGCGC CTGCCCGCCC AGCTCTACAC CACGCTGATT CGCGGGGTGC CGGACCTGGT GCTGATGCTG CTGATCTTCT ACAGCCTGCA AACCTGGCTG ACGACGCTCA CCGATTACCT GGAATGGGAA TACATCGAGA TCGACCCGTT CAGTGCCGGG GTCCTGACCC TGGGCTTCAT TTATGGCGCG TACTTCACTG AAACCTTTCG CGGGGCGATT CTCGCCGTGC CGCGCGGTCA GGTCGAAGCC GCCACCGCCT ATGGTCTCAA GCGCGGCCAG CGCTTTCGCT TCGTGGTGTT CCCGCAAATG ATGCGCTTCG CCCTGCCGGG CATCGGCAAC AACTGGATGG TGATGCTCAA GGCCACCGCG CTGGTTTCGA TCATCGGCCT GGCCGATCTG GTCAAGGCCG CACAGGACGC CGGCAAGAGC ACCTATCAGC TGTTTTACTT CCTGGTGCTC GCCGCGTTGA TTTACCTGCT CATCACCAGT GCCTCGAACT TCATCCTGCG CTGGCTCGAA CGCCGCTACG CCGCCGGTGC AAGGGAGGCC GTACGATGA
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Protein sequence | MFETLLQNLG LSAFSLKGFG PLLLEGTWMT IKLSALSLLV AVLLGLLGAS AKLSKIKLLR LPAQLYTTLI RGVPDLVLML LIFYSLQTWL TTLTDYLEWE YIEIDPFSAG VLTLGFIYGA YFTETFRGAI LAVPRGQVEA ATAYGLKRGQ RFRFVVFPQM MRFALPGIGN NWMVMLKATA LVSIIGLADL VKAAQDAGKS TYQLFYFLVL AALIYLLITS ASNFILRWLE RRYAAGAREA VR
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