Gene Pfl01_1209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1209 
Symbol 
ID3717058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1380804 
End bp1381532 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content61% 
IMG OID 
Productamino acid ABC transporter permease 
Protein accessionYP_346941 
Protein GI77457436 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.638371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAA CCCTCTTACA AAATCTGGGG CTCTCCGCCT TCAGCCTCAA GGGCTTTGGC 
CCGTTGCTGT TGGAAGGCAC CTGGATGACC ATCAAATTGT CGGCGTTGTC GCTGCTGGTG
GCCGTGTTGC TCGGCCTGCT CGGCGCCAGT GCCAAGCTGT CAAAAATCAA GCTGCTGCGC
CTGCCCGCCC AGCTCTACAC CACGCTGATT CGCGGGGTGC CGGACCTGGT GCTGATGCTG
CTGATCTTCT ACAGCCTGCA AACCTGGCTG ACGACGCTCA CCGATTACCT GGAATGGGAA
TACATCGAGA TCGACCCGTT CAGTGCCGGG GTCCTGACCC TGGGCTTCAT TTATGGCGCG
TACTTCACTG AAACCTTTCG CGGGGCGATT CTCGCCGTGC CGCGCGGTCA GGTCGAAGCC
GCCACCGCCT ATGGTCTCAA GCGCGGCCAG CGCTTTCGCT TCGTGGTGTT CCCGCAAATG
ATGCGCTTCG CCCTGCCGGG CATCGGCAAC AACTGGATGG TGATGCTCAA GGCCACCGCG
CTGGTTTCGA TCATCGGCCT GGCCGATCTG GTCAAGGCCG CACAGGACGC CGGCAAGAGC
ACCTATCAGC TGTTTTACTT CCTGGTGCTC GCCGCGTTGA TTTACCTGCT CATCACCAGT
GCCTCGAACT TCATCCTGCG CTGGCTCGAA CGCCGCTACG CCGCCGGTGC AAGGGAGGCC
GTACGATGA
 
Protein sequence
MFETLLQNLG LSAFSLKGFG PLLLEGTWMT IKLSALSLLV AVLLGLLGAS AKLSKIKLLR 
LPAQLYTTLI RGVPDLVLML LIFYSLQTWL TTLTDYLEWE YIEIDPFSAG VLTLGFIYGA
YFTETFRGAI LAVPRGQVEA ATAYGLKRGQ RFRFVVFPQM MRFALPGIGN NWMVMLKATA
LVSIIGLADL VKAAQDAGKS TYQLFYFLVL AALIYLLITS ASNFILRWLE RRYAAGAREA
VR