Gene Pfl01_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1158 
Symbol 
ID3716751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1333315 
End bp1334550 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content62% 
IMG OID 
ProductDNA circulation-like 
Protein accessionYP_346890 
Protein GI77457385 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGC GTGACCGTTT GTTGCCGGCA TCCTTTCGCG GTGTCGGTTT CTGGATCGAT 
CAGGCGAAAA CCCCGGTCGG TCGCAAGGGG CAGTTGCACG AGTATCCGCA ACGGGATCTG
CCGTTCTTCG AGGACCTTGG CCAGCAGGCC AAGACCCACG ACCTGACGGC GTTCATCATC
GGCGCCAATT GCCTGGAACA GCGCGACAAG CTGCTCCAGG CGCTGGAACA GGGCAGCGGC
GAACTGGTGC ATCCGTGGTT GGGGCGCTTG CAGGTCAAGG TCGGTGAGTG CGACATGACT
CACACCCGCC AGGACGGCGG GATGGTGACG TTCAGCCTGA AGTTCTACCC CGACCGGCCG
CTGCCGTTTC CGACGGCGAC GGTCAGCACG CAGAAAGTGC TGCTGGCCAA GGCCGACGGT
TTGCTCGGCT CGGCGGTGGC GCGCTTCGAA CAGGCGATGA CCCTGATCAA GGCCGCGCGG
ATCGGCATCG CCAATCTGCG CAACAGCCTC ACCGGTGTGT ACGACGTGAT CAAGGAGCAG
CTCAAGCCGC TGATCGCGCA GTACAAGCAG ATCACCGAAC TGGTCAGGGC CGTCAAGGAA
CTGCCCAAGG AAGTGGCGGC GGAGTTCAAG GGGTTGCTCG GCGATATCAA GGAGCTGAAG
GCATTCGCGA AGGAGGGCTA CCGTGGCGTG ATTGCCGACG TGTCCCAACA GATCGAAGCC
ATCCGCAAGG CCGATGCGCC GAAAATCACC ACCGGCAAGG ACACCAACGC CGCCGCGCAA
GCGATGGCCA ATCTGGTGCA GGACACGCTG ATCGTCAAAG TGGCGCAGTG GGTGGCCTCG
ATGCCGGTGG CGTCGACGCC GGTGAAACTC AACTCGACAC CTTCGCTGGA TCAGCAATCG
AAGCAGCCGG TCAGCCGTCA GGAAGTTCCG GTCACCGACG ATCTGCAAGC CCTGCAAAAA
GAGTTGAGCG ACGCGCTGCA AAAGGCCCAG GACAAGGCCG ACCCCGCGCA CTATCAAGCC
ATCGCCGATG TGAAGGAGGC GCTGATCGCG CACCTCAAGG CAGTGGCTTC GTCCGGTGTG
CGACTGGTCA GCAAAACGTT CCAGGAAACC TTTCCGGCAG TGGTCGTGGC CTACAAACAG
TTTGGCGACG CCACCCGGGT GACCGAGGTC ATTCAGCGCA ACGGTCTGTC TCATCCGGGG
TACTCACCCA ACGAAGTCAA GGTTTCCCGG GAGTGA
 
Protein sequence
MNWRDRLLPA SFRGVGFWID QAKTPVGRKG QLHEYPQRDL PFFEDLGQQA KTHDLTAFII 
GANCLEQRDK LLQALEQGSG ELVHPWLGRL QVKVGECDMT HTRQDGGMVT FSLKFYPDRP
LPFPTATVST QKVLLAKADG LLGSAVARFE QAMTLIKAAR IGIANLRNSL TGVYDVIKEQ
LKPLIAQYKQ ITELVRAVKE LPKEVAAEFK GLLGDIKELK AFAKEGYRGV IADVSQQIEA
IRKADAPKIT TGKDTNAAAQ AMANLVQDTL IVKVAQWVAS MPVASTPVKL NSTPSLDQQS
KQPVSRQEVP VTDDLQALQK ELSDALQKAQ DKADPAHYQA IADVKEALIA HLKAVASSGV
RLVSKTFQET FPAVVVAYKQ FGDATRVTEV IQRNGLSHPG YSPNEVKVSR E