Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1075 |
Symbol | |
ID | 3716480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1243601 |
End bp | 1244293 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | extensin-like protein |
Protein accession | YP_346807 |
Protein GI | 77457302 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.979022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCGCT GGCTACTGTT GGCGGGGCTG CTGATCATCG GTGGCGGCCT GATCGGCGTC TGGCGCGGCT GGCTCGATGT GCCGCCGCGG TGGAATCCGT GGGCGCCGCT GGACGTGCAG GCGACGCCCA ACTGGCTCAC AGGCTATAAG TTGATGCGTC TGCGTAGCAA TCCGCTCTTG TGCGAGCAGG CATTGGGCAG CTCCGGCCTG CGGGTTTCGC CACAGGCCGA CAGCCGCGAT GCCAAATGCC CGCTGATGGG TGCTTTGCGC GTGCAGGGCG GCGGGGTGGG GCTCAGCAGC AGCTTTCTCG CCAGTTGCCC GTTGGCCGTG GCGTTCGCGA TGTTCGAGCG TCATACGCTG CAACCGGCGG CGCAGTGGGC CTACGGTCAG CCGGTGGCGC GGGTCGATCA CCTCGGCAGC TTCGCCTGCC GCAACGTCTA CAACCGCGAG AACGGCGCGC TCAGTCGCCA CGCCAGCGCC GATGCGCTGG ACATTGCCGG CTTCCGTCTG GCGGATGGTC GCGCGATCAG CGTACTCAAG GACTGGCCGA AGCAAAATCA AGACGCGCAG TTTCTACGTC AGGTGCGCGA TGGTGCCTGC GAGTCGTTCA GTGTGGTGTT GAGTCCGGAT TACAACGCCG CCCATCGCAA CCACTTTCAT GTCGATGTCG GACGCTGGAG CGTGTGTCGC TGA
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Protein sequence | MGRWLLLAGL LIIGGGLIGV WRGWLDVPPR WNPWAPLDVQ ATPNWLTGYK LMRLRSNPLL CEQALGSSGL RVSPQADSRD AKCPLMGALR VQGGGVGLSS SFLASCPLAV AFAMFERHTL QPAAQWAYGQ PVARVDHLGS FACRNVYNRE NGALSRHASA DALDIAGFRL ADGRAISVLK DWPKQNQDAQ FLRQVRDGAC ESFSVVLSPD YNAAHRNHFH VDVGRWSVCR
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