Gene Pfl01_1075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1075 
Symbol 
ID3716480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1243601 
End bp1244293 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content66% 
IMG OID 
Productextensin-like protein 
Protein accessionYP_346807 
Protein GI77457302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.979022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCGCT GGCTACTGTT GGCGGGGCTG CTGATCATCG GTGGCGGCCT GATCGGCGTC 
TGGCGCGGCT GGCTCGATGT GCCGCCGCGG TGGAATCCGT GGGCGCCGCT GGACGTGCAG
GCGACGCCCA ACTGGCTCAC AGGCTATAAG TTGATGCGTC TGCGTAGCAA TCCGCTCTTG
TGCGAGCAGG CATTGGGCAG CTCCGGCCTG CGGGTTTCGC CACAGGCCGA CAGCCGCGAT
GCCAAATGCC CGCTGATGGG TGCTTTGCGC GTGCAGGGCG GCGGGGTGGG GCTCAGCAGC
AGCTTTCTCG CCAGTTGCCC GTTGGCCGTG GCGTTCGCGA TGTTCGAGCG TCATACGCTG
CAACCGGCGG CGCAGTGGGC CTACGGTCAG CCGGTGGCGC GGGTCGATCA CCTCGGCAGC
TTCGCCTGCC GCAACGTCTA CAACCGCGAG AACGGCGCGC TCAGTCGCCA CGCCAGCGCC
GATGCGCTGG ACATTGCCGG CTTCCGTCTG GCGGATGGTC GCGCGATCAG CGTACTCAAG
GACTGGCCGA AGCAAAATCA AGACGCGCAG TTTCTACGTC AGGTGCGCGA TGGTGCCTGC
GAGTCGTTCA GTGTGGTGTT GAGTCCGGAT TACAACGCCG CCCATCGCAA CCACTTTCAT
GTCGATGTCG GACGCTGGAG CGTGTGTCGC TGA
 
Protein sequence
MGRWLLLAGL LIIGGGLIGV WRGWLDVPPR WNPWAPLDVQ ATPNWLTGYK LMRLRSNPLL 
CEQALGSSGL RVSPQADSRD AKCPLMGALR VQGGGVGLSS SFLASCPLAV AFAMFERHTL
QPAAQWAYGQ PVARVDHLGS FACRNVYNRE NGALSRHASA DALDIAGFRL ADGRAISVLK
DWPKQNQDAQ FLRQVRDGAC ESFSVVLSPD YNAAHRNHFH VDVGRWSVCR