Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0954 |
Symbol | |
ID | 3715917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1110895 |
End bp | 1112346 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | alginate biosynthesis protein AlgX |
Protein accession | YP_346686 |
Protein GI | 77457181 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.216542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCCAC ACCTGATCAA ATTACTCAGC CTGTCGGCCC TGACCGTGGG CATCCTGGCG GCCAGCAACG GCGCCCGCGC AGATGAAGTC CAGCCGCCGA AATTCACGGC CGAGCCTTGC TGCAGCCTGT GCCCGGCCGC CCACGACGCG AAGAACTACA CCACTCGCTA CCAGCAGAAC TTCACCACTC TGGTACAGGC CCAGGGCGAC TGGTTGTTCC GGACCCAGGA AGACCTGCGC ACCGAGTTCA ACACCACACC GGCCGGCTAC AAACGCCTGC AACAGCTGCA CGATGCGTTC AAGGCCAAAG GCGTCGAACT GGTGATCGTC TACCAGCCGA CCCGTGGTCT GGTGAACCGC AACAAGCTCA ACCCGGCAGA AAAAGCCGCG TTCGATTACG AGAAAGCACT GGGCAACTAC AAGACCATGC TCGGCCGCTT CGCGAAGATG GGTTACGTGG TGCCGGACCT GTCGCCGCTG ACCAACGAAT CGCTGCCGGA CACCCTGCCT GCCCACGACT TCTACTTCCG CGGCGACCAG CACTGGACCC CGTACGGCGC CCAGCGCACG GCGAAAATCG TCGCCGAGAA GGTCAAGCAG ATCCCGGCCT TCGCCGACAT TCCCAAGCGT GAGTTCGAAA CCAAACGCTC CGGGCGCATG GGCAAGACCG GCACCCTGCA CAACATGGCC GGGCAACTGT GCGGCACCAG TTACGCGATC CAGTACATGG ACCAGTTCAC CACCGAGCCG AAAGGCGAGG CTGGCGACGG CGATCTGTTC GGTGATTCCG GCAATCCGCA AATCACCCTG GTCGGCACTT CGCACAGCGG CAAGAACTAC AACTTCGCCG GCTTCCTCGA AGAAGCCATC GGCGCCGACA TTCTCAACGT CGCCTTCCCC GGCGGCGGTC TGGAAGGTTC GATGCTGCAG TACCTGGGCA GCGACGAATT CCAGAAGACG CCGCCGAAAA TCCTTATCTG GGAATTCTCG CCGCTGTACC GCCTCGACCA GGAAACCATC TATCGCCAGA TGATGGCGCT GCTCGACAAC GGCTGCGAAG GCAAAGAGGC GCAAATGTCC GCCAGCACCA CGCTCAAGCC GGGCGGCAAA CAAGAACTGC TGGTCAACAG CAAGAACCTG AACCTGCAGA ACAGCAGCCA TCAGGTCGAC ATCCGCTTCG CCGACACCTC GGTGAAAACC CTGCAAGCCA CCCTCTGGTA CATGAACGGT CGCCACGAGG ACATCAAGAT CGAGAAACCG GAAACCTCCG ACACCGACGG TCGTTTCGCC TTTGAGTTGC GCACGGACGA AGACTGGGCC TCGCAAAACC TGCTGGCGGT CGAAGTCCAG GGTCCGGAAG CGGGCACCGC GCCACAGAAA GTCGAAGCGA AAATCTGCAA ACGCAACGTA TTCCCGGGCG CTGGGCAACA AACCGCTCAG GTCGGGCAAT GA
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Protein sequence | MHPHLIKLLS LSALTVGILA ASNGARADEV QPPKFTAEPC CSLCPAAHDA KNYTTRYQQN FTTLVQAQGD WLFRTQEDLR TEFNTTPAGY KRLQQLHDAF KAKGVELVIV YQPTRGLVNR NKLNPAEKAA FDYEKALGNY KTMLGRFAKM GYVVPDLSPL TNESLPDTLP AHDFYFRGDQ HWTPYGAQRT AKIVAEKVKQ IPAFADIPKR EFETKRSGRM GKTGTLHNMA GQLCGTSYAI QYMDQFTTEP KGEAGDGDLF GDSGNPQITL VGTSHSGKNY NFAGFLEEAI GADILNVAFP GGGLEGSMLQ YLGSDEFQKT PPKILIWEFS PLYRLDQETI YRQMMALLDN GCEGKEAQMS ASTTLKPGGK QELLVNSKNL NLQNSSHQVD IRFADTSVKT LQATLWYMNG RHEDIKIEKP ETSDTDGRFA FELRTDEDWA SQNLLAVEVQ GPEAGTAPQK VEAKICKRNV FPGAGQQTAQ VGQ
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