Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0943 |
Symbol | |
ID | 3715788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1094928 |
End bp | 1096298 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | major facilitator transporter |
Protein accession | YP_346675 |
Protein GI | 77457170 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTATC GCTCGAAAGT CGCGCTGGTG TATCTGTTGG GGTTCGCCCT CGACCTGCTG AACATGTTCG CCGCGAGCAT CGCCTACCCG GACATCGCCG CGCAGTTGCG CGCTTCGGTG ACGCAACTGG CGTGGATCAC CAACGCCTAC ATGCTCGGGC TGACGCTGAT CATTCCGATG AGCGTTTGGC TCGCGGCAAA GGTTGGCGAG CGGCGGCTGA TCCTCGGTTC GCTGCTGGTG TTCGGGATTG CCTCCGGGCT TATCGCTCAG GCGAGCTCGA TTGAAAGTCT GATCGGCTGG CGACTGCTGC AAGGGCTGGG TGGCGGGTTG CTGCTTCCGG TTGGTCAGGC GCTGGCCTAT CGAGAGTTTC CGGCGACACA ACGCGCGCAC TTCACCGGTG TGGTGTTGCT GGTGGCGCTG ATGGTGCCGG CGCTGTCGCC GGCGGCTGGA GGCTTGATCG TTGAGGCATT GTCGTGGCGC TGGATTTTCC TTCTGAACAT GCCGGTGGCG CTTTTCGCTT TCGGTCTGGG CCTGCGCTGG TTGAAAGCGG ATCAGGCTGC GAGTGAACGC CCGAAACTGG ACGCTCGCGG CCTGCTGCTG GCGGTGGCCG CGCTGAGTCT GTTGCTGATG GCCGTCAGTC TGGCGAGCGC CCCCGCAACC CGACATCTCG CCGGCGGTGT CCTGCTGCTC AGCGTCATCA CCTTGTGGAT CTACCTGCGC GATGGCTGGA ACAAACCGGG TGCAGTCCTT GATCTGCAAC TGATCAAGAA CCCGTCATTG CGCCTGGCGA TGCTGATCTA CCTGTTCGTG CCCGGCATCT TTACCGGCAC CAACATGATT GCCGTGTTGT ACCTGCACGA TCTCGGTTTC GGCGCAGCAC AAACCGGGGC GCTGATGCTG GCCTGGGCGG CGGCCTCGGG CGTGGCGATC ATGCTGGGCA AACGCAGCTT CAACCGGATC GGCCCCAAGC CATTGCTGAT CGCCGGCATG TTGCTGCAAT GCCTTGGCAT CGTCGTGCTG ATGCAGATCG ATCAACCCGC CAGCGGCCCG TTGATCCTCG CCTATGCCCT GATGGGGTTG GGCGGCAGCC TGTGCAGCGT CACCGCGCAG ACCCTGGCAT TTGTCGGCAT CACGCCGGAA AAAATGGGTC ACTCCAGCGC TCTGTGGAAT ATCAATCGCC AACTCGGTTT CTGCCTCGGC GCGGCACTGC TCAGCTCCCT GTTGGACGCT TTGGGCGCCA ACGGATTCAA ATACTGCTTT CTCGCCGCTG CACTGCTCAC GCTGTTGCCG ATGGCCGCCG TGTTGCGTTT CGACTCGACA AAAGTGCTAG CCCTTCTGCG CTCAACTCAC CTTCAGGAAA AATCCACATG A
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Protein sequence | MAYRSKVALV YLLGFALDLL NMFAASIAYP DIAAQLRASV TQLAWITNAY MLGLTLIIPM SVWLAAKVGE RRLILGSLLV FGIASGLIAQ ASSIESLIGW RLLQGLGGGL LLPVGQALAY REFPATQRAH FTGVVLLVAL MVPALSPAAG GLIVEALSWR WIFLLNMPVA LFAFGLGLRW LKADQAASER PKLDARGLLL AVAALSLLLM AVSLASAPAT RHLAGGVLLL SVITLWIYLR DGWNKPGAVL DLQLIKNPSL RLAMLIYLFV PGIFTGTNMI AVLYLHDLGF GAAQTGALML AWAAASGVAI MLGKRSFNRI GPKPLLIAGM LLQCLGIVVL MQIDQPASGP LILAYALMGL GGSLCSVTAQ TLAFVGITPE KMGHSSALWN INRQLGFCLG AALLSSLLDA LGANGFKYCF LAAALLTLLP MAAVLRFDST KVLALLRSTH LQEKST
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