Gene Pfl01_0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0943 
Symbol 
ID3715788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1094928 
End bp1096298 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content62% 
IMG OID 
Productmajor facilitator transporter 
Protein accessionYP_346675 
Protein GI77457170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTATC GCTCGAAAGT CGCGCTGGTG TATCTGTTGG GGTTCGCCCT CGACCTGCTG 
AACATGTTCG CCGCGAGCAT CGCCTACCCG GACATCGCCG CGCAGTTGCG CGCTTCGGTG
ACGCAACTGG CGTGGATCAC CAACGCCTAC ATGCTCGGGC TGACGCTGAT CATTCCGATG
AGCGTTTGGC TCGCGGCAAA GGTTGGCGAG CGGCGGCTGA TCCTCGGTTC GCTGCTGGTG
TTCGGGATTG CCTCCGGGCT TATCGCTCAG GCGAGCTCGA TTGAAAGTCT GATCGGCTGG
CGACTGCTGC AAGGGCTGGG TGGCGGGTTG CTGCTTCCGG TTGGTCAGGC GCTGGCCTAT
CGAGAGTTTC CGGCGACACA ACGCGCGCAC TTCACCGGTG TGGTGTTGCT GGTGGCGCTG
ATGGTGCCGG CGCTGTCGCC GGCGGCTGGA GGCTTGATCG TTGAGGCATT GTCGTGGCGC
TGGATTTTCC TTCTGAACAT GCCGGTGGCG CTTTTCGCTT TCGGTCTGGG CCTGCGCTGG
TTGAAAGCGG ATCAGGCTGC GAGTGAACGC CCGAAACTGG ACGCTCGCGG CCTGCTGCTG
GCGGTGGCCG CGCTGAGTCT GTTGCTGATG GCCGTCAGTC TGGCGAGCGC CCCCGCAACC
CGACATCTCG CCGGCGGTGT CCTGCTGCTC AGCGTCATCA CCTTGTGGAT CTACCTGCGC
GATGGCTGGA ACAAACCGGG TGCAGTCCTT GATCTGCAAC TGATCAAGAA CCCGTCATTG
CGCCTGGCGA TGCTGATCTA CCTGTTCGTG CCCGGCATCT TTACCGGCAC CAACATGATT
GCCGTGTTGT ACCTGCACGA TCTCGGTTTC GGCGCAGCAC AAACCGGGGC GCTGATGCTG
GCCTGGGCGG CGGCCTCGGG CGTGGCGATC ATGCTGGGCA AACGCAGCTT CAACCGGATC
GGCCCCAAGC CATTGCTGAT CGCCGGCATG TTGCTGCAAT GCCTTGGCAT CGTCGTGCTG
ATGCAGATCG ATCAACCCGC CAGCGGCCCG TTGATCCTCG CCTATGCCCT GATGGGGTTG
GGCGGCAGCC TGTGCAGCGT CACCGCGCAG ACCCTGGCAT TTGTCGGCAT CACGCCGGAA
AAAATGGGTC ACTCCAGCGC TCTGTGGAAT ATCAATCGCC AACTCGGTTT CTGCCTCGGC
GCGGCACTGC TCAGCTCCCT GTTGGACGCT TTGGGCGCCA ACGGATTCAA ATACTGCTTT
CTCGCCGCTG CACTGCTCAC GCTGTTGCCG ATGGCCGCCG TGTTGCGTTT CGACTCGACA
AAAGTGCTAG CCCTTCTGCG CTCAACTCAC CTTCAGGAAA AATCCACATG A
 
Protein sequence
MAYRSKVALV YLLGFALDLL NMFAASIAYP DIAAQLRASV TQLAWITNAY MLGLTLIIPM 
SVWLAAKVGE RRLILGSLLV FGIASGLIAQ ASSIESLIGW RLLQGLGGGL LLPVGQALAY
REFPATQRAH FTGVVLLVAL MVPALSPAAG GLIVEALSWR WIFLLNMPVA LFAFGLGLRW
LKADQAASER PKLDARGLLL AVAALSLLLM AVSLASAPAT RHLAGGVLLL SVITLWIYLR
DGWNKPGAVL DLQLIKNPSL RLAMLIYLFV PGIFTGTNMI AVLYLHDLGF GAAQTGALML
AWAAASGVAI MLGKRSFNRI GPKPLLIAGM LLQCLGIVVL MQIDQPASGP LILAYALMGL
GGSLCSVTAQ TLAFVGITPE KMGHSSALWN INRQLGFCLG AALLSSLLDA LGANGFKYCF
LAAALLTLLP MAAVLRFDST KVLALLRSTH LQEKST