Gene Pfl01_0908 details

Gene Information

• Locus tag: Pfl01_0908
• ID: 3715811
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas fluorescens Pf0-1
• Kingdom: Bacteria
• Replicon accession: NC_007492
• Strand: +
• Start bp: 1055875
• End bp: 1059306
• Gene Length: 3432 bp
• Protein Length: 1143 aa
• Translation table: 11
• GC content: 53%
• Product: hypothetical protein
• Protein accession: YP_346640
• Protein GI: 77457135

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGAATGA TGTTTAAAGA ATCAATGGTT GACGCTGTTT TGGATAATCC GGATGGGCAA 
GTTGCGCTGG ATGACGCACG GCGTACGGGG GAAGAGTTGA GGGGGATGCT GGAACGTTCT 
CCTTCCCTGA GAGAAGTTGT ACGAAAAAGG CTTTCGGAAC GATTCGAACG ATTGGGGAAG 
TCTCTTGATG TGGAGCGTTT GTATATCAAT GCCGGTTCTG ATCAATATGA AATCGAGAGC 
AGGCCGTCCG GTTCCATACT TGATGTTTTT TTTGATCTCC TGAAGCGTGC TGTTTATCCG 
TCTTATATCC AGAATCATGA CTTTGTCTAT TTGAGCCCGG GTACAACAGA TGCGCGCTTG 
AAAATCGAGA GTTTAAAGAT TGTCGACGTC GAGGACGTTT TGACTCAGGC GTTACAACAG 
TTGGCCAGTG ATCAGGCGAG CGCCTCGCGT CAATATTGGA GCAGTTCAAT TCGCAGCCAG 
TCCGGGGAGT TGACAACTCA CAAAGTATTG TTGGAAGCGG CGTTTGCCGA AGCATTGCGG 
GCCGAGTTGG CTCTGACGGA AGTAGCAGGT TCGCTCAAGA GTTATCAGGC ACTGCGTGCC 
AGGGAGATGT TGAGGATGGA CTCGCCCGGT GCGTATAAAA TCAGTATTCG CGCGACATCC 
GGTATTGCGC GGGATCTGGC GTCTGGCTTT GTCATGTCCT ATTCCAGCAT CGCAGATTCT 
GAGGTCAAGC TGTCCAGCGA TGCTTATGGC TGGTTCCTTT ATACCCCGGA CAAGGGTTTC 
GAATATTTCT CCAGCAGTTC CGACTTGCAT GCAGCACTGT GCAGCCGACT GGCAGTCGCG 
CCTGATGCCA TCAGGTATCC GGCATTGTCA GTCAGCCTGT TCACACACTG CGTGGACAGC 
AGGCTCAAGG AGCAGGAGAC ACACTTTGCT GCACGGCTCA GATCCGGTGA GCAACGCCAG 
GAAGGATTTG TCCAGGAACT GGAAAAAATT CATCAGGTCT TTGCGATGCA TTCGGATCTG 
AACCAACGGA TCGGCGCTCT GCGCGTACTC GTCAAGCGTC TGACGTGGCC AGACTGGTTA 
AAATCGGCCG GTGAGTCTGT AGGTCATGCT TACGAAACCC TGGAGGCTTC GAAAGAAGGG 
TATGAATTCG AGCACGCCCA GGTATTCGAT ACGCTGTTCT CACTGCGTCA TTTCGCCGTA 
GAACATTTCG GTGCCTGGTG TGAAAGCGCA TTGGGCATGC GTCTGGACCC GGATGCGATC 
AAGGTCCACA GCCTGCACCG GATCAAGGTC GGCGGACGCA CGATCGAGCA GGAGGACACT 
TGCACCCTGA CCGAGTTCAT CATTATCGGC CTGCAGGATG CCGGCAACCG CGCGAGCCTG 
CGCATAGAGG GTGCTCCGGC AGATAGCGGG TTGACCGTCG CCAGACTGGA AGGCTGGTTA 
TCCAATCGGG ACCTGCGCGT GGAGTTCAGC AATTCCCTGC CGTCCAACAG TCCGCAAATG 
TTTCGCGAGT CCTACTTCAA TTATCTGCAC AGTCAGGCGG AGTTCGCACT GTTCGTTGCC 
CAACATTCTG CAGTTTTCAA TGAAGCAGAT GCTGCATTGA TCAAACGCAC GTTGCAGGGT 
GACCCTTCCG TGGAAATTCG CGGAGTGAAA CTGAAATCTC GACCTTCGAT TTTGCAAGAC 
GTGCTGTTGT TCGTTTCGCG CACAACAAGT ACTCGTTACG CGTTGATGAA AATGCCCCAT 
GGTCAATTCG AATTCGTGAA GTTTGCCGAC ATTTACCAGT TCAATCGCTG GCTGGAGTCT 
ATGTTGTCGG ATAATCGCGC GTATGCCGAA TCATTGATCC CGCCTGACGA CCTGGCCACT 
GCCGGCCAAC TGATGGGAGG AGGATCTACC GCACTGCATT ACATGTATGA ACTGGATCCT 
TTGCCGGGTT ACATGGCTCT GAAGGCGGGT GAGCCGTTAT TCGGTTATAG CGAAGTGGCT 
TATGCGAATG AAGCAGGCCG TGTTCGAGCG CTGGCACCTC CAGCCTACAC CTATGCGGGA 
ATAGCGGCGC GGCAAAGATA TGTGCGCCTC AGTACTGAAC TCAGGGCATT GTCGATGGTG 
AACTCCCGGG ATAATGGCTT TCCGACTTTT GAGCAATTTA CCCGTGCCCT GATCAAACAA 
AGGATTGAAG AATTACTGCT TTCTCGTGGT CAGACGGTTC AAGTCGATCC CGATAAAATC 
ATGATTCAGA CCGACGATTT TCATCTGGAT CTGACCACTG TCCTGATTGA AGGCCATAAC 
TTCGACGTCC CCGAGACGCC CGGTCGGACG CCTGATGAGA ATCCGAAGTT CTACGTGACC 
GGTGGACACC CTTCGATTGA AAAACTGGAT ATCAGGGATC TTTCCAGCTG GTCGGAAACC 
TTGCGTCCTG GGAATCACTA CACCCGTCTT TTGCAAAACG ACTATCTGGA CCGGAAACAT 
CCGGGCTATG AGTTCAAGCG GGCTGTGCAT GCCACAAAAA TCCGCTGCGA GATGCACTTC 
GACGCCTGTC ATCAGTATTT CTCCGGGAAC CTCTCTACGG AAGTCTTCAA AGGGATTCAA 
CGCCTGGTCG ACAACCTGAG CGAGACCGCC GGCACGGATG GCTCTCCGTT TCCATCGAAT 
ACAAACGAGG GGATCTACAA GTTCCGCCTG CTGAGCCGGC GAATCGTCGA AGGTGTTTAT 
ATTTTCCGGA TGTCCATTAA TGGAAAATTC CATGACTATC TTTACACGCC CAATGCGCCT 
GACGGTGTGA GTTTCCGTTC GCTCAACGAG TTTGTCGGCT CCATTCGTTA CCGTTATGGG 
CCTTTCCGTG ATTACTACAC GGCGAGGGTG AAGATTGACG ACCGCAAGGT TGTGGATGAT 
TACTTCGACA ACCTTGTTGC CACGGTCAAT GCCGTCGCAC CACCTCAACC CGAAGGCCAG 
GTACGGTTGC TGGGTCTCTC TATGCTTCAT GACGACAGTA TCTATCGCGT TCTCAGCGAT 
ATTGACGCAC GAACCACAAG TCTGAATGAG GTCATAGCCG GTCTGGTGTA TGACAATGTG 
ATTTTTGCCG CCAACATTAT CAGTCTTGTG ATTCCTCCCG TTGGAGTAGT GGTCACCGCC 
GTGGAAGTGT TCAAGAGCCT TTATGACGGT GCCAGAGCGT ATGAGCAGGG TGATTACTCA 
TCCGCCTTTG GCCACGGAAA ATCCGCGCTG ATCGGATTGG TGAGTCTCGG AAAGGCAGCC 
GCAGCCGGCA AACCGGTCAA GGTGACACAG GCTCAGAAGA GTTTGTTTGA CCTGGGCAAG 
GATGCCAGGA CCGTGGTGGG CTGGATGGCC CAGGCCACAG GGCAGAAGTT GGGAGAAAAG 
CGCCTGATCG AAATCATCGA GCAATTGATG AAGGATCATC AGAGCCGCAG GAGTCAGACC 
ACCGTCCTGT GA 

 

Protein sequence

MGMMFKESMV DAVLDNPDGQ VALDDARRTG EELRGMLERS PSLREVVRKR LSERFERLGK 
SLDVERLYIN AGSDQYEIES RPSGSILDVF FDLLKRAVYP SYIQNHDFVY LSPGTTDARL 
KIESLKIVDV EDVLTQALQQ LASDQASASR QYWSSSIRSQ SGELTTHKVL LEAAFAEALR 
AELALTEVAG SLKSYQALRA REMLRMDSPG AYKISIRATS GIARDLASGF VMSYSSIADS 
EVKLSSDAYG WFLYTPDKGF EYFSSSSDLH AALCSRLAVA PDAIRYPALS VSLFTHCVDS 
RLKEQETHFA ARLRSGEQRQ EGFVQELEKI HQVFAMHSDL NQRIGALRVL VKRLTWPDWL 
KSAGESVGHA YETLEASKEG YEFEHAQVFD TLFSLRHFAV EHFGAWCESA LGMRLDPDAI 
KVHSLHRIKV GGRTIEQEDT CTLTEFIIIG LQDAGNRASL RIEGAPADSG LTVARLEGWL 
SNRDLRVEFS NSLPSNSPQM FRESYFNYLH SQAEFALFVA QHSAVFNEAD AALIKRTLQG 
DPSVEIRGVK LKSRPSILQD VLLFVSRTTS TRYALMKMPH GQFEFVKFAD IYQFNRWLES 
MLSDNRAYAE SLIPPDDLAT AGQLMGGGST ALHYMYELDP LPGYMALKAG EPLFGYSEVA 
YANEAGRVRA LAPPAYTYAG IAARQRYVRL STELRALSMV NSRDNGFPTF EQFTRALIKQ 
RIEELLLSRG QTVQVDPDKI MIQTDDFHLD LTTVLIEGHN FDVPETPGRT PDENPKFYVT 
GGHPSIEKLD IRDLSSWSET LRPGNHYTRL LQNDYLDRKH PGYEFKRAVH ATKIRCEMHF 
DACHQYFSGN LSTEVFKGIQ RLVDNLSETA GTDGSPFPSN TNEGIYKFRL LSRRIVEGVY 
IFRMSINGKF HDYLYTPNAP DGVSFRSLNE FVGSIRYRYG PFRDYYTARV KIDDRKVVDD 
YFDNLVATVN AVAPPQPEGQ VRLLGLSMLH DDSIYRVLSD IDARTTSLNE VIAGLVYDNV 
IFAANIISLV IPPVGVVVTA VEVFKSLYDG ARAYEQGDYS SAFGHGKSAL IGLVSLGKAA 
AAGKPVKVTQ AQKSLFDLGK DARTVVGWMA QATGQKLGEK RLIEIIEQLM KDHQSRRSQT 
TVL