Gene Pfl01_0900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0900 
Symbol 
ID3715803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1043100 
End bp1043786 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content65% 
IMG OID 
ProductLrgB-like protein 
Protein accessionYP_346632 
Protein GI77457127 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.688785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTG AGCTGATGCC GATGTTCTGG CTGGCGTTCA CGTTGCTGGC CTACCTGTTC 
AGTCGCTGGC TGTATCGCCG GACCGGGCGT TACGTGCTGT CGCCACTGAT TCTGGTCCCC
GCGTTGCTGC TGGCGCTTGC CGTGCCGCTG CACACCGCTT ACGCCGAATA TTCGAGCAAC
ACCCATTGGC TGATGCTGGT ACTGGGCCCG GTCACCGTGG CGTTTGCGGT GCCGATCTGG
CAACAGCGGC GTTTGCTGGT GCGGCATTGG TCAGCGTTGC TGCTGGGCAT GCTGGCTGGC
AGTGCGGCGT CGATCGCCAC CTCGTTCGGC CTCGCGAAAG CGCTGGCGCT GGACAGTTCG
GTGACGCTGT CGCTGGTGCC GCGTTCGATC ACCACGCCGT TCGCCATGCC GCTGGCGCAG
GACCTGGGTG GTGTGCCTGA GCTGACAGCG GTGTTCGTGA TGTTCACCGG TGTGTTCGGC
GCGATGCTCG GTGGTGTGCT GCTCAAGTGG CTGCCTTTGC GCAGCGCCCT GGCGCGCGGT
GCATTATTCG GCGTCGGTGC GCACGGTGCC GGGGTCAGCC GGGCCCATGA AGTGGGCGGC
GAAGAAGGTT CGGTGGCGGG GTTGGTGATG GTGCTGACGG GGTTGCTCAA TCTGTTCGCC
GCGCCTTTGT TGGCGGCGGT GCTTTGA
 
Protein sequence
MKLELMPMFW LAFTLLAYLF SRWLYRRTGR YVLSPLILVP ALLLALAVPL HTAYAEYSSN 
THWLMLVLGP VTVAFAVPIW QQRRLLVRHW SALLLGMLAG SAASIATSFG LAKALALDSS
VTLSLVPRSI TTPFAMPLAQ DLGGVPELTA VFVMFTGVFG AMLGGVLLKW LPLRSALARG
ALFGVGAHGA GVSRAHEVGG EEGSVAGLVM VLTGLLNLFA APLLAAVL