Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0900 |
Symbol | |
ID | 3715803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1043100 |
End bp | 1043786 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | LrgB-like protein |
Protein accession | YP_346632 |
Protein GI | 77457127 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.688785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTTG AGCTGATGCC GATGTTCTGG CTGGCGTTCA CGTTGCTGGC CTACCTGTTC AGTCGCTGGC TGTATCGCCG GACCGGGCGT TACGTGCTGT CGCCACTGAT TCTGGTCCCC GCGTTGCTGC TGGCGCTTGC CGTGCCGCTG CACACCGCTT ACGCCGAATA TTCGAGCAAC ACCCATTGGC TGATGCTGGT ACTGGGCCCG GTCACCGTGG CGTTTGCGGT GCCGATCTGG CAACAGCGGC GTTTGCTGGT GCGGCATTGG TCAGCGTTGC TGCTGGGCAT GCTGGCTGGC AGTGCGGCGT CGATCGCCAC CTCGTTCGGC CTCGCGAAAG CGCTGGCGCT GGACAGTTCG GTGACGCTGT CGCTGGTGCC GCGTTCGATC ACCACGCCGT TCGCCATGCC GCTGGCGCAG GACCTGGGTG GTGTGCCTGA GCTGACAGCG GTGTTCGTGA TGTTCACCGG TGTGTTCGGC GCGATGCTCG GTGGTGTGCT GCTCAAGTGG CTGCCTTTGC GCAGCGCCCT GGCGCGCGGT GCATTATTCG GCGTCGGTGC GCACGGTGCC GGGGTCAGCC GGGCCCATGA AGTGGGCGGC GAAGAAGGTT CGGTGGCGGG GTTGGTGATG GTGCTGACGG GGTTGCTCAA TCTGTTCGCC GCGCCTTTGT TGGCGGCGGT GCTTTGA
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Protein sequence | MKLELMPMFW LAFTLLAYLF SRWLYRRTGR YVLSPLILVP ALLLALAVPL HTAYAEYSSN THWLMLVLGP VTVAFAVPIW QQRRLLVRHW SALLLGMLAG SAASIATSFG LAKALALDSS VTLSLVPRSI TTPFAMPLAQ DLGGVPELTA VFVMFTGVFG AMLGGVLLKW LPLRSALARG ALFGVGAHGA GVSRAHEVGG EEGSVAGLVM VLTGLLNLFA APLLAAVL
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