Gene Pfl01_0894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0894 
Symbol 
ID3715685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1039043 
End bp1040002 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content59% 
IMG OID 
ProductMerR family transcriptional regulator 
Protein accessionYP_346626 
Protein GI77457121 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTGA TCACAGACGT TCGCCCTGCT TCGCAGGAAT CTGTTGCGCT GGAGCGCGAG 
GATCTTTTCC CTATACGTGA AGTGGCGCGC CTGACCGGGG TGAACCCGGT GACATTGCGC
GCATGGGAGC GGCGATACGG ATTGATCCAG CCAACGCGCA CCGAGAGTGG GCATCGCCTG
TATTCGATGA CCGATATCGA GCGTGTTCGC AGCATCGTCG ACTGGATCGA CCGGGGTGTT
GCCGTGAGCA AGGTGGGCAA GATCCTGGCC AAGACCGAGC CGATGAAGGT GCTGGCTCAT
CTGATTCCCG ATGACCTGGT GCACGCGGAC TATATCCAGT GGCAGGAGCA GGTTAAGCAG
GCGGTCAGCA CTTTCGACGA TCAGTTGCTT GATCGGGTCT ACGGTCAGAT TTTCTCTTCC
TATGCTTTGC CCGTGGTGTT TCAGGACATC CTGATGCCGC TGTGGCTGCA AATGCTGCAG
CGTCAGGATG CATTCGGGCA AACCAGTGAG TGGTTGTTCT TCGATGGTTT TCTGAGAGCC
AAGGTGCTGC AGCGCATTGT CGTGCTGCGT GGCTCGCAAC CGCGCAAGGT AATTGTCAGC
GCGCTGGCCG GTCAATGTCG CGAGCTCGAA TTGCTGGTGG CGGCGCTGTT CCTCAGTGGC
AATGACGCGG GCGTTCGTGT GCTCACGACC GGTCAGCCGT TCGATGAGCT GACGCTGGTG
TGCGAAAAGA TCAAACCTCA AGCCCTCGTG CTTTTTTCCA ATCACGCACC GACTGCCGAG
CTTCCAAGGC GGCTGAACCG GTTGGCGCTG AGTCTGGATT GTCAGTTGCT GCTGGCGGGC
GATGCGGCCG ATCTGGCCCA GGACAGCCTG GCGGGATCAT CGGTCGGCTG TCTGGGCAAT
GAAGGTTCGA CAATGCGCCA GCGAATGAAT CAGTTTCTGG CGGGGACGCT GGATACCTGA
 
Protein sequence
MPVITDVRPA SQESVALERE DLFPIREVAR LTGVNPVTLR AWERRYGLIQ PTRTESGHRL 
YSMTDIERVR SIVDWIDRGV AVSKVGKILA KTEPMKVLAH LIPDDLVHAD YIQWQEQVKQ
AVSTFDDQLL DRVYGQIFSS YALPVVFQDI LMPLWLQMLQ RQDAFGQTSE WLFFDGFLRA
KVLQRIVVLR GSQPRKVIVS ALAGQCRELE LLVAALFLSG NDAGVRVLTT GQPFDELTLV
CEKIKPQALV LFSNHAPTAE LPRRLNRLAL SLDCQLLLAG DAADLAQDSL AGSSVGCLGN
EGSTMRQRMN QFLAGTLDT