Gene Pfl01_0826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0826 
Symbol 
ID3715482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp972799 
End bp974112 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content59% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346558 
Protein GI77457053 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.108201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATC CACAAAACGA TCCACAACAA CCGCCGGTCC CGCTCATTGC CCGGTTCGAG 
GAGTTGTTTA GCGAAACGGG GATCGAGATC GACGGCGAAC AGTCTCACCT CATATTGCTG
GCGACCGATT CGCACATCGA GCCCCCGCCT CCCAACCCGG GTAAACCAAG GGCAAGCAAA
GGGATCGGGC TGTATTACGA AATACTTGAA CACACGGCCA TCGGCGACAA TGTGCTGCTG
CGTCAGGACA CAACAACGCC ACCAAGACCG GCCAGCAAGG TTCCCCTGCA TCTGCCCAAT
GGATTGGCAC TGACCTACGG TCAGATATTG GGCTTGGGTG GCGATTTCTA TGGGATCCCC
GAGCAACCGA TCTGCGACGG CGCGACAGCC GCCGAGCGCC TTCAGCGCTT TACTGCTGCG
TTCAATTCCC TGGCAACCGC ATTTTCTGCG AAAGCTGAGG CAGGCAAGAT TCTTGAGGTC
GCCAAACAAG AGGCTGCGGC GGTCGAACAA GCCATCCACG AGGGCAAGCC CGCGCATGAG
GCGTACGAGA AACTGGGTGA TACGTTGTCC GAAGAGTGGA ATAAAATCAC CGGCGGCGGA
AGTTTTGTCT CCGCCCTGTT TCCACTGGGT CGCTATCTGA AACTCGCGGC CAACAACCCC
GACCATTTTG GCAAATGGGC AAAACGCGCC TATATCGCCG GCCACTCGGC AGCACTCAAA
AAGGCCGTCG CCGCCCATGG GACGCAGGAC ACCGCGGCCC TGGAACTGGC CTACGCCATG
AATGCCTTCG CCGATCATTT CCTCACCGAC CTGTTTGCCT CCGGTCACCT GCGCGTTCCG
CGCCGTGAGC TGGCGGCGGT GGTGACACCC GGCGATCTGG GTTCGCTGAT TTCTCGTTTC
ATGCACGACG AAGACAACCA GTTTGGCCTC AAGGTGCGCA ACAGCCTGAG CGAGCACTGG
CGCACTTTTG GCGACAAACG CTACTTCGAC CTCATCCCTG ACGAGGAACA GTTCGCCAAC
CAGTCCCATG TCAAACAGGC TACCCAGGCC TCCGCCGACG AAGTGTTCGA CGCCTACCTC
AGTGGCAAGC GCCCTGATGA GTCCGATTTC GCCGCGCTGA AGCACCTGCC GGATCTCGAT
GATGTGCACA AAGTGGAGAA CAACTTCTCA CCACTGTTCC GCGTCCAGGG CAACAAAGTC
CTGCGGCGCA AGGACGTCAA CAACCTCAAC GACACCGCCA CCGTCGACGA CTGGTGGGGC
TGGAGCACTT ACCTGCTGCT CAAGGACTAT CACCCAGCCG GCAATACGAA TTAA
 
Protein sequence
MSDPQNDPQQ PPVPLIARFE ELFSETGIEI DGEQSHLILL ATDSHIEPPP PNPGKPRASK 
GIGLYYEILE HTAIGDNVLL RQDTTTPPRP ASKVPLHLPN GLALTYGQIL GLGGDFYGIP
EQPICDGATA AERLQRFTAA FNSLATAFSA KAEAGKILEV AKQEAAAVEQ AIHEGKPAHE
AYEKLGDTLS EEWNKITGGG SFVSALFPLG RYLKLAANNP DHFGKWAKRA YIAGHSAALK
KAVAAHGTQD TAALELAYAM NAFADHFLTD LFASGHLRVP RRELAAVVTP GDLGSLISRF
MHDEDNQFGL KVRNSLSEHW RTFGDKRYFD LIPDEEQFAN QSHVKQATQA SADEVFDAYL
SGKRPDESDF AALKHLPDLD DVHKVENNFS PLFRVQGNKV LRRKDVNNLN DTATVDDWWG
WSTYLLLKDY HPAGNTN