Gene Pfl01_0810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0810 
Symbol 
ID3715427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp954985 
End bp955953 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content63% 
IMG OID 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like 
Protein accessionYP_346542 
Protein GI77457037 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.342361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTGT TAGAAATCAA GAATCTCAAC GTTCGCTTCG GCGACAAGAA CGCCACCCCG 
GTCGTCGACG GCCTCGACCT GAAAGTCGAC AAGGGCGAAG TCCTGGCGAT CGTGGGCGAG
TCGGGTTCCG GCAAGTCCGT GACCATGATG GCGCTGATGG GCCTGATCGA GCACCCGGGG
ATCGTCACCG CCGACTCGCT GAGCTTCGAC GGCAAGAACA TGCTCAAGCT GAACAACCGC
CAGCGTCGGC AGATCGTCGG CAAAGACCTG GCGATGGTGT TCCAGGACCC GATGACCGCG
CTGAACCCGA GCTACACCGT CGGTTTCCAG ATCGAAGAAG TGCTGCGCCT GCACCTGAAA
ATGTCCGGCA AGCAGGCGCG CAAGCGTGCG ATCGAACTGC TGGAAAAAGT CGAAATCCCG
GGTGCCGCCA GCCGTATGGA CGCCTACCCG CACCAACTGT CCGGCGGCAT GAGCCAGCGT
GTGGCGATTG CCATGGCGAT TGCCGGCGAG CCGAAACTGC TGATCGCCGA CGAACCGACC
ACCGCACTCG ACGTGACGAT TCAGGCGCAG ATCATGGATC TGCTGCTGGC GTTGCAGAAA
GAGCAGAACA TGGGCCTGGT GCTGATCACC CACGACCTCG CCGTGGTGGC CGAAACCGCC
CAGCGCGTGT GCGTGATGTA CGCAGGTCAA GCCGTTGAAG TCGGTCAGGT GCCGCAACTG
TTCGACATCC CGGCGCACCC GTACAGCGAA GCGCTGCTCA AGGCGATTCC GGAACACAGC
CAGGGTGCCG AGCGTCTGGC CACTCTGCCG GGCATCGTTC CCGGCCGTTA CGACCGCCCG
CAAGGCTGTC TGCTGTCGCC GCGCTGCCCG TACGTGCAGG ACAGCTGCCG CGCGCAGCGT
CCGACCCTTG ACCCGAAAAG CCACAGCCTC GCCCGCTGCT TCTATCCGTT GAACCAGGAG
GTGGCGTAA
 
Protein sequence
MSLLEIKNLN VRFGDKNATP VVDGLDLKVD KGEVLAIVGE SGSGKSVTMM ALMGLIEHPG 
IVTADSLSFD GKNMLKLNNR QRRQIVGKDL AMVFQDPMTA LNPSYTVGFQ IEEVLRLHLK
MSGKQARKRA IELLEKVEIP GAASRMDAYP HQLSGGMSQR VAIAMAIAGE PKLLIADEPT
TALDVTIQAQ IMDLLLALQK EQNMGLVLIT HDLAVVAETA QRVCVMYAGQ AVEVGQVPQL
FDIPAHPYSE ALLKAIPEHS QGAERLATLP GIVPGRYDRP QGCLLSPRCP YVQDSCRAQR
PTLDPKSHSL ARCFYPLNQE VA