Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0789 |
Symbol | |
ID | 3715366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 926146 |
End bp | 928176 |
Gene Length | 2031 bp |
Protein Length | 676 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | chemotaxis sensory transducer |
Protein accession | YP_346521 |
Protein GI | 77457016 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.377611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0840542 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGAGCT TGCTCTATCC CGCCGTCTCG CTGATGAACC GCTTGAGCTT CGGCATGAAG TTCAGCCTGA TCAGCGTGCT GTTCCTGGTG CCGATGCTGG TGACCAATTT CTATCTGGTG CGCGATTCCT ATCGCGAATT CCAGGGCACC CGGGTGGAGC TGCAGAGCCT CGACCTGCTG GGCAGCAGCC TGACCCTGCG CCGGGATCTG GAAACCCTCA ACAATCTGGT GCAGATCAAC GTCACCCTCG GCCAGTCCGG AAAGGCCGGC AATGTCGAGG CGCAAATCGC CAGCCTTGAG CAAAACGTCC TGGCGCGCCT GCAAGGGCTG ACGCCCATGA CCGAGGATCC TGAGCAGATC AAGTTTTTCG AGGCCAAGCG CGATGAAATG ATCGCTGCGT TCAAGAACCA ACAAGCGGAA AACTCCCTGC AAAGCAAAAG TGCGCTGATC GGCAAACTGC TGGGCAATGC GCAGGTTTTC AGCCAGATCG TGGCCAGTCA GGCCGGATTG AGTCGCGACA ACCAGAGCGA CATTCGCCAG CTCACCGAGC TGATCACCGC GAATACGCCG GCCGTCACCC AGGCCTTGGG CGAAGGTCGG GCGATGGGTT CGTATTCATT GGGCCAGGGC TTTCTCAACA GTTCGTCGAG CACCCGTTTC GACGAGCTGC TGGTGCAGAT TGAAAAACTT CAGGCCGAAT ATGGCCTGAA ATTGCAGGAC GCGCTGGGCT CCAGCAAAGC CGCCCGTGAC TCCCTGAGCG CACTGGCGGA TGCCAGCAAG GCGTCGTTGA AACAGGCCGG CACACTGATC GAAGAACAAG TGGTGATGGC CGAAACGCTC GACGCTCCAT GGCAGGGGTT TTATGACCAG GTCACCGGGC TGATGGACCA GACCTATCAG CTCGACGACG CCACTCTGAA ATTCCTCGAC ACCCAATTGC AGCAGCGCCT GGGGCAAAAC CGCACGCACA TGGTGCTGCA AGCCGTGGCG TTGTCGGTAG TGTTCGTGCT GATTTTCTAT CTCTATGGCG GCTTCTACGC GTCGACCCGC GCGACCCTGA AAAACCTCGG CGCCATGATG GATAAGGTCG CGGCGGGCGA CATGACGGTG AATTTCCGCG CCAACAGCCG CGATGAACTC GGCGAGTTGG GCGAAGTGTT CAATGGTACG GTGCGGAAAA TCCACGACCT GATCGAACGG GTCGGCCATA CCGTTGGCGA GGTCGAGCGA CAGGCGGGGC AAGTGGAAAA CGTCTCGGCA CAAAGCAATC AGGCAGTCGC CGGGCAGCGC ACGCAGATCG AACAAGTGGC CACCGCGATG AACCAGATGT CGGCGACATC GCTGGAGGTG GCACGCAGTG CAGCGGCAGC GGTCAGCAGC GCCCACAGCG TGAACGACGA AACCATCAGT GGTCGCGGGC TGGTGGAATC GCAGCAGGGC AGCATCGCGG CACTGGCGAG CGAAATCGAT CAGTCGGTGC TGGTGATCAA CCAGTTGGCC AGCGACAGTC AGTCGATCAG CCGCGTTCTG GAAGTGATCA AGAGCATCGC CGAACAGACC AATCTGCTGG CGCTCAACGC CGCGATCGAG GCCGCGCGGG CCGGTGAGCA GGGCCGCGGT TTTGCCGTGG TCGCTGACGA AGTCCGGACG CTGGCCAAAC GCACTCAGCA ATCGACCGAA GAAATCGAAC AGATGATCGC CAAACTCCAC GGCGGCGTCG GCGCGGCAGT AAAGGCCATG GGCGTCAGCC ATCAGATGGC CAACGGCACG GTGGGACAGT CGGAAAAAGT CCAGCAGGCG CTGGAAAACA TCCTCGGCGC TGTGGGCATG ATCGTCGACC AGAACCAGCA GATTGCCGCC GCCGTCGAGC AGCAGACCGC CGTGGCCCAC GACATCGACC AGAACATCGT CGAGATCAAC CGTGCTGGCG AGCGCACCGC AGAAGGCGCG CATCAGACCG AAGATGCCAG CCGCGCGTTG TCGGCGCAGG TGGTCGAGTT GAAGCAGTTG ATCAGCGCGT TCCGGGTTTG A
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Protein sequence | MKSLLYPAVS LMNRLSFGMK FSLISVLFLV PMLVTNFYLV RDSYREFQGT RVELQSLDLL GSSLTLRRDL ETLNNLVQIN VTLGQSGKAG NVEAQIASLE QNVLARLQGL TPMTEDPEQI KFFEAKRDEM IAAFKNQQAE NSLQSKSALI GKLLGNAQVF SQIVASQAGL SRDNQSDIRQ LTELITANTP AVTQALGEGR AMGSYSLGQG FLNSSSSTRF DELLVQIEKL QAEYGLKLQD ALGSSKAARD SLSALADASK ASLKQAGTLI EEQVVMAETL DAPWQGFYDQ VTGLMDQTYQ LDDATLKFLD TQLQQRLGQN RTHMVLQAVA LSVVFVLIFY LYGGFYASTR ATLKNLGAMM DKVAAGDMTV NFRANSRDEL GELGEVFNGT VRKIHDLIER VGHTVGEVER QAGQVENVSA QSNQAVAGQR TQIEQVATAM NQMSATSLEV ARSAAAAVSS AHSVNDETIS GRGLVESQQG SIAALASEID QSVLVINQLA SDSQSISRVL EVIKSIAEQT NLLALNAAIE AARAGEQGRG FAVVADEVRT LAKRTQQSTE EIEQMIAKLH GGVGAAVKAM GVSHQMANGT VGQSEKVQQA LENILGAVGM IVDQNQQIAA AVEQQTAVAH DIDQNIVEIN RAGERTAEGA HQTEDASRAL SAQVVELKQL ISAFRV
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