Gene Pfl01_0710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0710 
Symbol 
ID3714724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp841082 
End bp841639 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content63% 
IMG OID 
Productchorismate lyase 
Protein accessionYP_346443 
Protein GI77456938 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00949148 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACAA GTCATTACTG GTCATCGCGA CCGCTGTCGG AATTGACCGG CTCCGAGCAT 
CACTGGCTGT TTTTGCCCGG GGCACTGACC CCACGTCTGA AAGCCATGGG CGATTATTCA
ATCGAAGTCG TCGAGCAGTC CCATGGCCCG CTCAATCCTG AAGAAGCGCA AGCGCTGAAC
GTGTCGCCAA ACACCATTGG TTGGGTGCGC GAAGTGGTGA TGAAGCTCGA CGGCGAGGCC
TGCGTCACCG CGCGCAGCCT GACCAGCGTG CCGGCGCTGA ATGGCGACTG GGCGGATCTG
AACGGCTACG GCCGTCGACC GCTGGCCGAG ATTCTCTACA CCTCGGAGCA GACCCTGCGC
GAACCATTCC AATGTGCCTT GCTGCCGCCC GGTGCGCCGT TGGCCGCGCT GTCCTATCGC
TACGCGCCGC AAGCCGAACG TCTGTTGGCC CGGCGTTCGC GTTTCACCCG CAATGGTTCG
GCGCTGCTGG TCAGCGAGTG CTTTCTGCCA GCGTTCTGGG CTCGGGTCGA GTACGCTCAG
GCGCTCAAGT CGGCCTGA
 
Protein sequence
MDTSHYWSSR PLSELTGSEH HWLFLPGALT PRLKAMGDYS IEVVEQSHGP LNPEEAQALN 
VSPNTIGWVR EVVMKLDGEA CVTARSLTSV PALNGDWADL NGYGRRPLAE ILYTSEQTLR
EPFQCALLPP GAPLAALSYR YAPQAERLLA RRSRFTRNGS ALLVSECFLP AFWARVEYAQ
ALKSA