Gene Pfl01_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0680 
Symbol 
ID3714297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp793872 
End bp794978 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content62% 
IMG OID 
Productinner-membrane translocator 
Protein accessionYP_346413 
Protein GI77456908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00660304 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTTT CCCTCGAACC CCGTGGCCGG CAATCGCGCC TGATGCTCTG GTGCTCGCCG 
GTGCTGGCGG CGGCGCTGAC GCTGGTCTGC GGATCTTTGC TGTTCGTCGC CCTCGGTCAC
GACCCGCTGA AAACCCTGCA CACGTTGTTG ATCGCCCCGG TCAGCGACCT GTATGGCGTC
TCCGAACTGC TGGTCAAAAC CCTGCCGATC CTCTTGTGTG CGTTGGGCCT CGCAGTGGCT
TATCAGGCGC GGATCTGGAA CATCGGCGCC GAAGGCCAGT TGCTGCTCGG TGCGTTGGCC
GGCAGTGCGC TGGCGGTGAA CATCATCGAT CTGCAAAGCC GTTGGGCGCT GGTGCTGATC
CTGCTTACCG GTACCTTCGC CGGCGCCGCG TGGGCCGGGC TCACCGCCTG GTTGCGCACA
TGCTTCAACG CCAACGAAAT CCTTACCAGC ATCATGCTCA ATTACATCGC GCTGAACCTG
TTGCTGTTCT GCGTACACGG GCCGCTGAAG GATCCGGCCG GATTCAACTT TCCCGAGTCG
GCAATGTTCA GCGACGCCAG CCGCCTGCCA CTGTTGATGG AGGACGGTCG GGCACACATC
GGCGTGTATT TCGCCTTGCT CGCGCTGGTC GCGGTGTGGG TGTTGTTGCA GAAAAGCTTC
GTCGGTTTCC AGATCAAGGT GCTGGGCCTG GACAAGCGAG CCGCAGGGTT TGTCGGGTTT
CGCGAGAAGC GGCTGATCTG GCTCGCACTG TTGATCAGCG GTGGATTGGC CGGGCTTGCC
GGTGTCTGCG AAGTCACCGG GCCGATCGGT CAACTGGTGC CACAGGTCTC GCCGGGCTAC
GGCTACGCGG CGATCACCGT GGCGTTTCTC GGGCGGCTCA ATCCGATCGG CATTCTGTTT
TCCAGCCTGT TGATGGCGCT GCTGTACATC GGTGGCGAGA GTGCGCAGAT GACGCTGAAT
CTGCCGCAGG CAATCACTCA GTTGTTCCAG GGAATGATGC TGTTTTTCCT GCTGGCCTGT
GACGTGCTGA TCCTCTATCG GCCACGTCTT AACCTGCGCT GGGTGCGGCG CACTTCTACC
ACCGCCGTAA CCGCCGGAGC GCTGTGA
 
Protein sequence
MLLSLEPRGR QSRLMLWCSP VLAAALTLVC GSLLFVALGH DPLKTLHTLL IAPVSDLYGV 
SELLVKTLPI LLCALGLAVA YQARIWNIGA EGQLLLGALA GSALAVNIID LQSRWALVLI
LLTGTFAGAA WAGLTAWLRT CFNANEILTS IMLNYIALNL LLFCVHGPLK DPAGFNFPES
AMFSDASRLP LLMEDGRAHI GVYFALLALV AVWVLLQKSF VGFQIKVLGL DKRAAGFVGF
REKRLIWLAL LISGGLAGLA GVCEVTGPIG QLVPQVSPGY GYAAITVAFL GRLNPIGILF
SSLLMALLYI GGESAQMTLN LPQAITQLFQ GMMLFFLLAC DVLILYRPRL NLRWVRRTST
TAVTAGAL