Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0680 |
Symbol | |
ID | 3714297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 793872 |
End bp | 794978 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | inner-membrane translocator |
Protein accession | YP_346413 |
Protein GI | 77456908 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00660304 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCTTT CCCTCGAACC CCGTGGCCGG CAATCGCGCC TGATGCTCTG GTGCTCGCCG GTGCTGGCGG CGGCGCTGAC GCTGGTCTGC GGATCTTTGC TGTTCGTCGC CCTCGGTCAC GACCCGCTGA AAACCCTGCA CACGTTGTTG ATCGCCCCGG TCAGCGACCT GTATGGCGTC TCCGAACTGC TGGTCAAAAC CCTGCCGATC CTCTTGTGTG CGTTGGGCCT CGCAGTGGCT TATCAGGCGC GGATCTGGAA CATCGGCGCC GAAGGCCAGT TGCTGCTCGG TGCGTTGGCC GGCAGTGCGC TGGCGGTGAA CATCATCGAT CTGCAAAGCC GTTGGGCGCT GGTGCTGATC CTGCTTACCG GTACCTTCGC CGGCGCCGCG TGGGCCGGGC TCACCGCCTG GTTGCGCACA TGCTTCAACG CCAACGAAAT CCTTACCAGC ATCATGCTCA ATTACATCGC GCTGAACCTG TTGCTGTTCT GCGTACACGG GCCGCTGAAG GATCCGGCCG GATTCAACTT TCCCGAGTCG GCAATGTTCA GCGACGCCAG CCGCCTGCCA CTGTTGATGG AGGACGGTCG GGCACACATC GGCGTGTATT TCGCCTTGCT CGCGCTGGTC GCGGTGTGGG TGTTGTTGCA GAAAAGCTTC GTCGGTTTCC AGATCAAGGT GCTGGGCCTG GACAAGCGAG CCGCAGGGTT TGTCGGGTTT CGCGAGAAGC GGCTGATCTG GCTCGCACTG TTGATCAGCG GTGGATTGGC CGGGCTTGCC GGTGTCTGCG AAGTCACCGG GCCGATCGGT CAACTGGTGC CACAGGTCTC GCCGGGCTAC GGCTACGCGG CGATCACCGT GGCGTTTCTC GGGCGGCTCA ATCCGATCGG CATTCTGTTT TCCAGCCTGT TGATGGCGCT GCTGTACATC GGTGGCGAGA GTGCGCAGAT GACGCTGAAT CTGCCGCAGG CAATCACTCA GTTGTTCCAG GGAATGATGC TGTTTTTCCT GCTGGCCTGT GACGTGCTGA TCCTCTATCG GCCACGTCTT AACCTGCGCT GGGTGCGGCG CACTTCTACC ACCGCCGTAA CCGCCGGAGC GCTGTGA
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Protein sequence | MLLSLEPRGR QSRLMLWCSP VLAAALTLVC GSLLFVALGH DPLKTLHTLL IAPVSDLYGV SELLVKTLPI LLCALGLAVA YQARIWNIGA EGQLLLGALA GSALAVNIID LQSRWALVLI LLTGTFAGAA WAGLTAWLRT CFNANEILTS IMLNYIALNL LLFCVHGPLK DPAGFNFPES AMFSDASRLP LLMEDGRAHI GVYFALLALV AVWVLLQKSF VGFQIKVLGL DKRAAGFVGF REKRLIWLAL LISGGLAGLA GVCEVTGPIG QLVPQVSPGY GYAAITVAFL GRLNPIGILF SSLLMALLYI GGESAQMTLN LPQAITQLFQ GMMLFFLLAC DVLILYRPRL NLRWVRRTST TAVTAGAL
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