Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0576 |
Symbol | |
ID | 3712259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 668400 |
End bp | 669674 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | heat shock protein YegD |
Protein accession | YP_346309 |
Protein GI | 77456804 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.267601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGACG CCTCTCCAGC CCGTGCCTGC GGCATCGACT TCGGCACGTC CAACTCCACC GTCGGCTGGC TGCGCCCCGG CATGGAAACG ATGATCGCGC TGGAAGACGA CAAGATCACC CTGCCATCGG TGGTCTTTTT CAATATCGAA GAGCGCCGTC CGGTATACGG CCGTCTGGCG CTGCACGAGT ACCTGGAAGG CTACGAAGGC CGACTGATGC GCTCGCTCAA GAGCCTGCTC GGTTCCAAGC TGATCAAGCA CGACACCAGC GTTCTCGGCA CCGCAATGCC GTTCAAGGAC CTGCTCGGGC TGTTCATCGG CCAGCTCAAG AGCCGCGCCG AAGCCGCCGC CGGTCGGGAG TTCGAGCAGG TGGTGCTGGG CCGCCCGGTG TTCTTCGTCG ACGACGATCC GCTGGCCGAC CAGGAAGCCG AAGACACCCT GGTGGAAGTG GCGCGCAAAC TCGGTTTCAA GGACGTGTCG TTCCAGTACG AGCCGATTGC CGCGGCCTTC GACTACGAGT CGACCATCGA AAAGGAAGAA CTGGTGCTGA TCGTCGACAT CGGCGGTGGT ACGTCGGACT TCTCGCTGGT GCGCCTGTCG CCCGAGCGTC GTGGTGTGGA TAATCGCCAC GACGACATCC TCGCCACCGG CGGCGTGCAC ATCGGCGGGA CCGACTTCGA CAAACAGTTG AGCCTGCAAG GCCTGATGCC GCTGTTCGGC TACGGCAGCC GGATGAAAAG CGGCGCGTTC ATGCCGACCA GCCACCACAT GAACCTGGCG ACCTGGCACA CCATCAACTC GGTGTACTCG CAGAAATCGA CCCTGGCCCT GGGCAGCATG CGCTACGACA TCGAAGACAC CGGCGGCATC GACCGTCTGT TCAAGCTGAT CGAACAGCGC GCCGGCCATT GGCTGGCGAT GGAAGTGGAA GAAACCAAGA TCCACCTGAC CCACAACGAC AGCCGCCATG TGCCGCTGGA TCGCATCGAG CCGGGCCTGA GCGTGGAACT GACCCGGGCG CTGTTCGAAT CGGCGATCGA GTCGCAGCTC GAGCGCGTGC GCGGCAGCGT CACCCAGTTG CTGGCGGACG CCAATGTGGC GGTGGGTCAG GTCGATACGG TGTTCTTCAC CGGTGGTTCG AGCGGCATTC CGGCACTGCG CAACAGCGTC TCGGCGATGC TGCCGAACGC GCGGCATGTG GAAGGGAATA TTTTTGGCAG CATTGGTAGC GGTCTGGCGA TTGAGGCCAT GAAACGTTAC GGCTCGGTGA ACTGA
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Protein sequence | MKDASPARAC GIDFGTSNST VGWLRPGMET MIALEDDKIT LPSVVFFNIE ERRPVYGRLA LHEYLEGYEG RLMRSLKSLL GSKLIKHDTS VLGTAMPFKD LLGLFIGQLK SRAEAAAGRE FEQVVLGRPV FFVDDDPLAD QEAEDTLVEV ARKLGFKDVS FQYEPIAAAF DYESTIEKEE LVLIVDIGGG TSDFSLVRLS PERRGVDNRH DDILATGGVH IGGTDFDKQL SLQGLMPLFG YGSRMKSGAF MPTSHHMNLA TWHTINSVYS QKSTLALGSM RYDIEDTGGI DRLFKLIEQR AGHWLAMEVE ETKIHLTHND SRHVPLDRIE PGLSVELTRA LFESAIESQL ERVRGSVTQL LADANVAVGQ VDTVFFTGGS SGIPALRNSV SAMLPNARHV EGNIFGSIGS GLAIEAMKRY GSVN
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