Gene Pfl01_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0576 
Symbol 
ID3712259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp668400 
End bp669674 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content63% 
IMG OID 
Productheat shock protein YegD 
Protein accessionYP_346309 
Protein GI77456804 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.267601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACG CCTCTCCAGC CCGTGCCTGC GGCATCGACT TCGGCACGTC CAACTCCACC 
GTCGGCTGGC TGCGCCCCGG CATGGAAACG ATGATCGCGC TGGAAGACGA CAAGATCACC
CTGCCATCGG TGGTCTTTTT CAATATCGAA GAGCGCCGTC CGGTATACGG CCGTCTGGCG
CTGCACGAGT ACCTGGAAGG CTACGAAGGC CGACTGATGC GCTCGCTCAA GAGCCTGCTC
GGTTCCAAGC TGATCAAGCA CGACACCAGC GTTCTCGGCA CCGCAATGCC GTTCAAGGAC
CTGCTCGGGC TGTTCATCGG CCAGCTCAAG AGCCGCGCCG AAGCCGCCGC CGGTCGGGAG
TTCGAGCAGG TGGTGCTGGG CCGCCCGGTG TTCTTCGTCG ACGACGATCC GCTGGCCGAC
CAGGAAGCCG AAGACACCCT GGTGGAAGTG GCGCGCAAAC TCGGTTTCAA GGACGTGTCG
TTCCAGTACG AGCCGATTGC CGCGGCCTTC GACTACGAGT CGACCATCGA AAAGGAAGAA
CTGGTGCTGA TCGTCGACAT CGGCGGTGGT ACGTCGGACT TCTCGCTGGT GCGCCTGTCG
CCCGAGCGTC GTGGTGTGGA TAATCGCCAC GACGACATCC TCGCCACCGG CGGCGTGCAC
ATCGGCGGGA CCGACTTCGA CAAACAGTTG AGCCTGCAAG GCCTGATGCC GCTGTTCGGC
TACGGCAGCC GGATGAAAAG CGGCGCGTTC ATGCCGACCA GCCACCACAT GAACCTGGCG
ACCTGGCACA CCATCAACTC GGTGTACTCG CAGAAATCGA CCCTGGCCCT GGGCAGCATG
CGCTACGACA TCGAAGACAC CGGCGGCATC GACCGTCTGT TCAAGCTGAT CGAACAGCGC
GCCGGCCATT GGCTGGCGAT GGAAGTGGAA GAAACCAAGA TCCACCTGAC CCACAACGAC
AGCCGCCATG TGCCGCTGGA TCGCATCGAG CCGGGCCTGA GCGTGGAACT GACCCGGGCG
CTGTTCGAAT CGGCGATCGA GTCGCAGCTC GAGCGCGTGC GCGGCAGCGT CACCCAGTTG
CTGGCGGACG CCAATGTGGC GGTGGGTCAG GTCGATACGG TGTTCTTCAC CGGTGGTTCG
AGCGGCATTC CGGCACTGCG CAACAGCGTC TCGGCGATGC TGCCGAACGC GCGGCATGTG
GAAGGGAATA TTTTTGGCAG CATTGGTAGC GGTCTGGCGA TTGAGGCCAT GAAACGTTAC
GGCTCGGTGA ACTGA
 
Protein sequence
MKDASPARAC GIDFGTSNST VGWLRPGMET MIALEDDKIT LPSVVFFNIE ERRPVYGRLA 
LHEYLEGYEG RLMRSLKSLL GSKLIKHDTS VLGTAMPFKD LLGLFIGQLK SRAEAAAGRE
FEQVVLGRPV FFVDDDPLAD QEAEDTLVEV ARKLGFKDVS FQYEPIAAAF DYESTIEKEE
LVLIVDIGGG TSDFSLVRLS PERRGVDNRH DDILATGGVH IGGTDFDKQL SLQGLMPLFG
YGSRMKSGAF MPTSHHMNLA TWHTINSVYS QKSTLALGSM RYDIEDTGGI DRLFKLIEQR
AGHWLAMEVE ETKIHLTHND SRHVPLDRIE PGLSVELTRA LFESAIESQL ERVRGSVTQL
LADANVAVGQ VDTVFFTGGS SGIPALRNSV SAMLPNARHV EGNIFGSIGS GLAIEAMKRY
GSVN