| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0547 |
|---|
| Symbol | nadE |
|---|
| ID | 3712942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 639208 |
|---|
| End bp | 640035 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | NAD synthetase |
|---|
| Protein accession | YP_346280 |
|---|
| Protein GI | 77456775 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.269229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.247569 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCCG TACAGCGTGA GATTGCTGAA CAGCTCAACG TTCAGCCGCC GTTCGCCGAT
GACCAGGCCC TCGAAGCGGA AGTCGCCCGC CGCATCAGCT TCATCCAGGA TTGCCTGACC
AGTTCCGGAC TCAAGACCCT GGTGCTGGGC ATCAGCGGCG GGGTCGATTC CCTGACCGCC
GGCCTTCTGG CCCAGCGTGC GATGCGCGAG TTGCGCGAGC GCACTGGTGA CGAGGCCTAC
AAGTTCATCG CCGTGCGCCT GCCGTATGAC GTGCAGTTCG ATGAACACGA CGCCCAGGCC
TCGGTGGACT TCATCGCCCC GGACGAACGC CACACCGTCA ACATCGGCCC GGCGGTCAAA
TCCCTGGCCA GCGAAGTCGC AGCCTTCGAA GGCAAGCACG CGGTGTCGGT GGACTTCGTG
CTCGGCAACA CCAAGGCGCG GATGCGCATG GTCGCCCAGT ACACGATCGC CGGCGCGACT
CATGGTCTGG TGATCGGCAC CGACCACGCG GCGGAAGCGG TGATGGGTTT CTTCACCAAG
TTCGGTGACG GCGCCTGCGA TCTGGCCCCG CTCAGCGGTC TGGTGAAAAA CCAGGTCCGG
GCCATCGCCC GCAGCTTCGG CGCACCGGAA TCACTGGTGG AAAAAGTGCC GACGGCGGAT
CTGGAAGACC TGTCGCCGGG CAAGCCGGAC GAGGCGTCAC ACGGCGTGAC CTACGCCGAG
ATCGACGCTT TCCTGCACGG AGAGCCGGTG CGTCAGGAGG CGTTCGACAT CATCGTCAAC
ACCTACAAAA AGACTCATCA CAAGCGGGTC ATGCCGTTTG CGCCTTGA
|
|---|
| Protein sequence | MQAVQREIAE QLNVQPPFAD DQALEAEVAR RISFIQDCLT SSGLKTLVLG ISGGVDSLTA
GLLAQRAMRE LRERTGDEAY KFIAVRLPYD VQFDEHDAQA SVDFIAPDER HTVNIGPAVK
SLASEVAAFE GKHAVSVDFV LGNTKARMRM VAQYTIAGAT HGLVIGTDHA AEAVMGFFTK
FGDGACDLAP LSGLVKNQVR AIARSFGAPE SLVEKVPTAD LEDLSPGKPD EASHGVTYAE
IDAFLHGEPV RQEAFDIIVN TYKKTHHKRV MPFAP
|
|---|
| |