Gene Pfl01_0482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0482 
Symbol 
ID3713239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp559557 
End bp560261 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content59% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346215 
Protein GI77456710 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.724265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAC GTTATCTCTG GAAATTGCTG CCCAAGCCGC AGCGGGCCTT TTTGCTGGGG 
CGTCTGTCGG TGGTTGACCG GCAAGTGGTG AACAAATCGA TGTCGGCCAG TCTGGCCTTT
CCTGCCGCCT TCGAGCAGCG CGACTGTCTG TTTATCCACG TACCCAAATG CGCCGGAAGC
AGCTTGTGTG CGGCGATGTT CGACGGCTGG CGTCCCGGAC ACTTGCCGTT GTACTGGTAC
GAAGAGCAAT TTCCCGAGCA ATATGCCGCC GCCTACAAAT TCGCCTTTGT GCGCGACCCG
CTGGAGCGCG CCTATTCGGC GTACGCCTTT TTGCATGGCA ACACCTTGAG CGGGCGTGAT
CACGCCGCTC AGCAGATGGT TCGACAATAT CGGGATTTCG ACGATTTTGT CGCACGCTGG
CTGCATCCGG AGACGATCTC GCGGCAGCTG CACTTTGCCG CACAGACCGA CTTTCTCACC
GACTCGCTGG GGCATCTGGC TCTGGATTTC ATCGGTTACC AGGAACATCT GGAACAGGAT
TTCAAACAGG TCTGTGACCG CTTGGGGATG GTGTGTCAGT TGCCGCACGT CAACAGCTCG
CGGCAACGTC AACCACTGAA GGCGCGGGAG TTCTGCTCGG CGCGAACCCG TCGGCTGGTG
CGTCGGGCCT ATCAGCGCGA CTACGAGTTG CTCGGTTATG AATGA
 
Protein sequence
MLQRYLWKLL PKPQRAFLLG RLSVVDRQVV NKSMSASLAF PAAFEQRDCL FIHVPKCAGS 
SLCAAMFDGW RPGHLPLYWY EEQFPEQYAA AYKFAFVRDP LERAYSAYAF LHGNTLSGRD
HAAQQMVRQY RDFDDFVARW LHPETISRQL HFAAQTDFLT DSLGHLALDF IGYQEHLEQD
FKQVCDRLGM VCQLPHVNSS RQRQPLKARE FCSARTRRLV RRAYQRDYEL LGYE