| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0404 |
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| Symbol | |
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| ID | 3712490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 459017 |
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| End bp | 461464 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_346137 |
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| Protein GI | 77456632 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0818527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.504343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTCGTC TGCTGAAATT TTTCGGTTGG TCCATCGTCG CCGTTTTCTG CGGACTGCTT
TTAGGTCTCA GCGGCGCGTT TCTTTACCTT AGTCCGGGTT TGCCATCTGT GGAGGCGCTG
AGAAGCATTC AGTTGCAGAT TCCGCTCCGG GTCTACAGCA GCGACAACAA GTTGATCGCA
GAATTTGGCG AAATGCGCCG CACACCGATC CGTTTCGCCG ACATTCCCCC CAATTTCATC
AATGCGTTAC TAAGTGCTGA AGACGACAAC TTCGCCAACC ACTACGGCGT TGATCCGAGC
AGCCTGATGC GTGCCGCGAC CCAACTGGTC AAGAGCGGGC ACATCCAGTC CGGCGGCAGC
ACCATCACCA TGCAGGTGGC GAAGAACTTC TTCCTGACCA GCGAGCGCAG CTTCTCGCGC
AAGACCACTG AAATCCTTCT CGCCCTGCAG ATCGAACGCC AACTGACCAA GGACGAGATC
CTTGAGCTGT ACGTGAACAA GATCTATCTG GGCAACCGCG CCTACGGCAT CGAGGCGGCG
GCACAGGTGT ATTACGGCAA GTCGATCCGC GAAGTCAGCC TGGCGCAGAT GGCGATGATC
GCCGGCCTGC CGAAAGCCCC GTCGCGCTTC AACCCGCTGG CCAACCCGGC GCGCAGCAAG
GAGCGTCGTG ACTGGATCCT TGGCCGCATG TACAAGCTCG GCAAGATCAC CGAAGCCGAC
TACACCGCCG CGATCAACGA GCCGCTGAAT GCCAGCTATC ACGTGCCGAC CCCGGAAGTG
AACGCGCCGT ACATCGCCGA GATGGCCCGT GCGGAAATGG TCGGTCGCTA CGGCAGCGAC
GCCTATACCG AAGGTTTCCG CGTTACCACC ACGGTGCCGA GCAACCTCCA GGAAATGGCC
AACACCGCGC TGCATGAAGG CCTGATGACC TACGACCAGC GTCACGGCTA CCGTGGCCCT
GAATCACGCC TGCCGGGCAA GACCCGTGAA GCCTGGGCCA CCGAACTGAC CAAGCAACGC
ACCATCAGCA GCCTCGAGCC GGCCATCGTC ACCCAGGTCG ACAAGACCGG CCTGCAAGTG
CTGACCCGCA CCGGCGAAGA GCATGTGGCG TGGGACACCA TGAAATGGGC GCGACCGTTC
CTCAACACCA ACAGCATGGG CGCCGCGCCG CGTCAGCCGT CGGATGTGGC ACAGATCGGC
GACCTGATTC GCGTGCAGCG CCAGCCGAAC AATTCGCTGA AGTTCAGCCA GATTCCGCAG
GCGCAAGGCG CGCTGGTGTC ACTGGATCCG CAGAACGGCG CGATCCGTTC GCTGGTCGGT
GGTTTCGCCT TCGAGCAGAG CAACTACAAC CGCGCGATGC AGGCCAAGCG TCAGCCGGGC
TCGAGCTTCA AGCCGTTCGT CTACAGCGCC GCGCTGGATA ACGGCTACAC CGCCGCCAGC
CTGGTCAACG ACGCACCGAT CGTGTTCGTC GACGAGTACC TGGACAAGGT CTGGCGTCCG
AAGAACGACA CCAACACTTT CCTCGGCCCG ATCCGCCTGC GTGAGGCGCT GTACAAGTCG
CGCAACCTGG TGTCGATCCG CCTGTTGCAG GCGATGGGCG TAGGCAAGAC CATCGACTAC
ATCACCCGCT TCGGCTTCAA CAAGCAGGAC CTGCCGCCAA ACCTGTCGCT GGCGCTGGGC
ACCGCGACCC TGACGCCGAT GGAAATCGCC ACTGGCTGGA GCACCTTTGC CAACGGCGGC
TACAAGATCA CCCCGTACAT CATCGACAAG ATCGAAAGCC GCAATGGCGA TACTCTCTTC
GTCGCCAACC CGCCAACCGT ACCGCAGGGC GCCGCAGCTA CCGACGGCAT TGCCGCACCC
GCCACCCAGG CGTTTACCGT CAATGTAGCG CCGGTTCCGG GTGAAGCGCC GGGCAACGCT
GCCGTGCCCC AAGCACCAGC CGTCGCCGAG CGCATCGTCG ATGGCCGTAC CACCTACATC
CTCAACAGCA TGCTGCAGGA CGTGATCAAG CTTGGCACCG GCCGGCGCGC ACTGGCTCTG
GGCCGCAGCG ACATCGCCGG CAAGACCGGT ACCACCAACG AATCCAAGGA TGCGTGGTTC
TCCGGCTACA ACGCCGACTA CGTGACCACC GTGTGGACCG GTTTCGACCA GCCGGAAAGC
CTCGGTCGCC GGGAATTCGG GGGCACCGTG GCACTGCCGA TCTGGATGAA CTACATGGCC
GCCGCGCTCA AGGACAAGCC ACCGCATGTC CAGCCGGAGC CGGAAGGCAT CCTCAGCCTG
CGGGTGGATC CGGTGAGCGG TCGTGCGGCA TCGCCGAGCA CGCCGGGTGC GTACTTCGAG
CTGTTCAAGG CTGAGGACAC GCCGCCGTCG GTCAACGAGA TCGGCAATGG CGCCGTACCG
GGCAGTCCGC TGCCGGCGGA TGAACAGGCG CCGATCGATT TGTTCTGA
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| Protein sequence | MIRLLKFFGW SIVAVFCGLL LGLSGAFLYL SPGLPSVEAL RSIQLQIPLR VYSSDNKLIA
EFGEMRRTPI RFADIPPNFI NALLSAEDDN FANHYGVDPS SLMRAATQLV KSGHIQSGGS
TITMQVAKNF FLTSERSFSR KTTEILLALQ IERQLTKDEI LELYVNKIYL GNRAYGIEAA
AQVYYGKSIR EVSLAQMAMI AGLPKAPSRF NPLANPARSK ERRDWILGRM YKLGKITEAD
YTAAINEPLN ASYHVPTPEV NAPYIAEMAR AEMVGRYGSD AYTEGFRVTT TVPSNLQEMA
NTALHEGLMT YDQRHGYRGP ESRLPGKTRE AWATELTKQR TISSLEPAIV TQVDKTGLQV
LTRTGEEHVA WDTMKWARPF LNTNSMGAAP RQPSDVAQIG DLIRVQRQPN NSLKFSQIPQ
AQGALVSLDP QNGAIRSLVG GFAFEQSNYN RAMQAKRQPG SSFKPFVYSA ALDNGYTAAS
LVNDAPIVFV DEYLDKVWRP KNDTNTFLGP IRLREALYKS RNLVSIRLLQ AMGVGKTIDY
ITRFGFNKQD LPPNLSLALG TATLTPMEIA TGWSTFANGG YKITPYIIDK IESRNGDTLF
VANPPTVPQG AAATDGIAAP ATQAFTVNVA PVPGEAPGNA AVPQAPAVAE RIVDGRTTYI
LNSMLQDVIK LGTGRRALAL GRSDIAGKTG TTNESKDAWF SGYNADYVTT VWTGFDQPES
LGRREFGGTV ALPIWMNYMA AALKDKPPHV QPEPEGILSL RVDPVSGRAA SPSTPGAYFE
LFKAEDTPPS VNEIGNGAVP GSPLPADEQA PIDLF
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