Gene Pfl01_0302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0302 
Symbol 
ID3713192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp350434 
End bp351144 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content62% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_346035 
Protein GI77456530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0186456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.262092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACT CGAAAAAAAC CGTCGTTATC ACTGGCGCCT CTCAAGGTCT GGGCGAAGGC 
ATGGTCAAGG CCTTCCGTGA ACTGGGCTAC AACATCGTCG CCACCTCGCG CTCGATCAAG
CCGTCGAACG ACCCGCAGAT CCTGACCATC GCCGGCGACA TCGGCGACCC GGCCACCGCT
CAACGGGTGA TCAGCGAAGG CGTGGCACGC TTCGGCCGCA TCGACACCCT GGTCAACAAC
GCCGGCATCT TCGTCGCCAA ACCGTTCACC GCCTACACCC CGGAAGACTA CGCGGCGGTG
CTGTCGGTCA ACCTCAACGG CTTCTTCTAC ATCACCCAAC TGGCCATCGC CGAGATGGAA
AAACAGGGCA AGGGCCACGT GGTCAACATC ACCACCAGCC TGGTCGACCA CGCCATCGAC
GGCGTGCCCT CGGTCCTCGC TTCGCTGACC AAGGGTGGCC TCAACGCCGC CACCAAATCC
CTGGCCATCG AATACGCCAA ACGCGGAATA CGGGTGAACG CGGTATCGCC GGGCATCATC
AAAACGCCGA TGCACGGCGA GGAAACCCAT GAGGCACTGG GCGCGCTGCA TCCGGTTGGA
CACATGGGCG AAATCGACGA CATTGCGCAG GCGGTGGTGT ACCTCGATAA CGCGAACTTT
GTGACTGGCG AGATTCTGCA TGTGGATGGC GGGCAGAGCG CAGGGCACTG A
 
Protein sequence
MSNSKKTVVI TGASQGLGEG MVKAFRELGY NIVATSRSIK PSNDPQILTI AGDIGDPATA 
QRVISEGVAR FGRIDTLVNN AGIFVAKPFT AYTPEDYAAV LSVNLNGFFY ITQLAIAEME
KQGKGHVVNI TTSLVDHAID GVPSVLASLT KGGLNAATKS LAIEYAKRGI RVNAVSPGII
KTPMHGEETH EALGALHPVG HMGEIDDIAQ AVVYLDNANF VTGEILHVDG GQSAGH