Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0302 |
Symbol | |
ID | 3713192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 350434 |
End bp | 351144 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_346035 |
Protein GI | 77456530 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0186456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.262092 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACT CGAAAAAAAC CGTCGTTATC ACTGGCGCCT CTCAAGGTCT GGGCGAAGGC ATGGTCAAGG CCTTCCGTGA ACTGGGCTAC AACATCGTCG CCACCTCGCG CTCGATCAAG CCGTCGAACG ACCCGCAGAT CCTGACCATC GCCGGCGACA TCGGCGACCC GGCCACCGCT CAACGGGTGA TCAGCGAAGG CGTGGCACGC TTCGGCCGCA TCGACACCCT GGTCAACAAC GCCGGCATCT TCGTCGCCAA ACCGTTCACC GCCTACACCC CGGAAGACTA CGCGGCGGTG CTGTCGGTCA ACCTCAACGG CTTCTTCTAC ATCACCCAAC TGGCCATCGC CGAGATGGAA AAACAGGGCA AGGGCCACGT GGTCAACATC ACCACCAGCC TGGTCGACCA CGCCATCGAC GGCGTGCCCT CGGTCCTCGC TTCGCTGACC AAGGGTGGCC TCAACGCCGC CACCAAATCC CTGGCCATCG AATACGCCAA ACGCGGAATA CGGGTGAACG CGGTATCGCC GGGCATCATC AAAACGCCGA TGCACGGCGA GGAAACCCAT GAGGCACTGG GCGCGCTGCA TCCGGTTGGA CACATGGGCG AAATCGACGA CATTGCGCAG GCGGTGGTGT ACCTCGATAA CGCGAACTTT GTGACTGGCG AGATTCTGCA TGTGGATGGC GGGCAGAGCG CAGGGCACTG A
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Protein sequence | MSNSKKTVVI TGASQGLGEG MVKAFRELGY NIVATSRSIK PSNDPQILTI AGDIGDPATA QRVISEGVAR FGRIDTLVNN AGIFVAKPFT AYTPEDYAAV LSVNLNGFFY ITQLAIAEME KQGKGHVVNI TTSLVDHAID GVPSVLASLT KGGLNAATKS LAIEYAKRGI RVNAVSPGII KTPMHGEETH EALGALHPVG HMGEIDDIAQ AVVYLDNANF VTGEILHVDG GQSAGH
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