Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0275 |
Symbol | |
ID | 3713262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 320449 |
End bp | 322377 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_346008 |
Protein GI | 77456503 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0919838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAACA CCCTGGAACA GGTTTTCGGT TATCCACAGT TTCGACCCGG CCAGGAAGCG GCGATCAGCG CTGTGCTCGC CGGGCGCTCG GCAGCCGCGA TATTTCCCAC CGGCTCCGGC AAATCCCTTT GTTACCAGGT CCCGGCACTC TTGCTGCCGC ACCTGACGCT GGTGGTCTCA CCGTTGCTGG CGCTGATGCA GGATCAGCTC GAGTTCTTGC GCCGGCACGG GATATCCGCA GGCAGCATCG ACTCGACGCA GAGCCGCGAA GACGCCAACG ATGTGATGGC CCGCGCCCGT TCGGGCGAAT TGAAGATCCT GATGATTTCC GTGGAGCGTT TGAAGAACGA GCGCTTTCGC AACTTTTTGC AGCAGGTGCC GATCTCGCTG CTGGTGGTGG ATGAGGCGCA CTGCATCTCC GAATGGGGCC ACAACTTTCG CCCTGACTAC CTCAAGCTGC CGGACTACCA GCGTCAGTTC AACATCCGGC AAACCTTGCT GCTGACCGCC ACGGCAACGC CGAAGGTCAT CGCCGACATG CAGGCGAAAT TCTCCATTGC TGAAGACGAT GTGGTGACCA CCGGTTTCTA TCGGCCCAAC CTCAATCTGC TGGTCGAGCC GGTGCGTGGG CAGGACAAGC GCCGACGGCT GGTGGAGTGG ATGAGCGCGC GCGCGGGCCA GCCGAGCATC GTTTACGTCA CCCTGCAGAA AACCGCCGAG CAGATTGCCG AACATCTGGA GCGCAATGGC ATTCAGGCCG AGGCTTACCA CGCCGGTTTG CCCCATGAAC AGCGGGACGC GATCCAGAAG CGCTTCATGG GCGGGCAGTC CAATTGCATC GTCGCCACCA TCGCCTTCGG CATGGGCATC GACAAGAGCG ACATCCGCAA CGTGGTGCAT TTCGATCTGC CCAAATCCAT CGAAAACTAC AGCCAGGAAA TCGGTCGCGC CGGACGTGAC GGGCAGCCCT CAGATTGTCT GGTACTGGCC AATCGCGACA GTCTCAACGT GCTGGAAAAC TTCGTGTATG GCGACACGCC GGAGCAAGAT GGCATTCGTC ACGTGCTCGA CGAGTTGCAG GCCGCCGCGC CCGAAGGCCA ATGGGAATTT CTGCTCGGAC CGCTGGCGGA TCAGAGCAAC ATTCGCGCGC TGCCTTTGAA GACGTTACTG GTGCAGCTGG AGCTGCGAGG GCTGATTGCC CCGCGCTACG CGTACTACGC CGAATATCGC TTCAAATACC TGCTGGAGCC CGACACGTTG CTTGAGCGTT TCGAAGGTGA ACGAAGGGAT TTCGTCGCCG CGATCATCCA GACCTCAAGC CGCGCACGCA CCTGGGCCAC GGTGAATTTC GAGGCGATGT ACGAGCAGTA TTCCGCCGAG CGCAACCGGG TGGTGAAGGC CCTGGATTAT TTCCAGGAGA AGGGCTGGGT CGAGCTTGAG AGCAAGCAGA TGACCGAGGT CTACAACGTC CTGCGTGGCG ATTTCGACAG CCAGGTCTTG AGCGCTGAAC TGCATGAGTA CTTCACCCGC CATGAGCAAA CCGAAGTGGC GCGGATTCAC GCCATGCTCG AGCTGTTCGC CACCGAGCGA TGCCTCGGTT ATCGGCTGGC CGAATATTTC GGTGATCACA ATGCGCCGCA GCAATGCGGG CATTGCTCGG TGTGCCACGG GCACGTCGCC CGGTTGCCGG CACCGCCGGA ATTGCCGGCG CTTGTGGATA AAAACTTTAC GGAGTTGTGT GGGGAATTTA TCCACAGGCA TCAGCAGTAC GCTGGCAGTG CTCCGTCGGC CGAGCGGCTG ACCCGGTTCC TCTGCGGAAT CAGTGTGCCG CTGTTTACCA AACTCAAGGC CCGGGCCATT TCCGGGTTTG CGGCACTGGA GGAGTATCCC TACGCCGAGG TTCGGGCCTG GGCTCAGGCG CATCTTTGA
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Protein sequence | MHNTLEQVFG YPQFRPGQEA AISAVLAGRS AAAIFPTGSG KSLCYQVPAL LLPHLTLVVS PLLALMQDQL EFLRRHGISA GSIDSTQSRE DANDVMARAR SGELKILMIS VERLKNERFR NFLQQVPISL LVVDEAHCIS EWGHNFRPDY LKLPDYQRQF NIRQTLLLTA TATPKVIADM QAKFSIAEDD VVTTGFYRPN LNLLVEPVRG QDKRRRLVEW MSARAGQPSI VYVTLQKTAE QIAEHLERNG IQAEAYHAGL PHEQRDAIQK RFMGGQSNCI VATIAFGMGI DKSDIRNVVH FDLPKSIENY SQEIGRAGRD GQPSDCLVLA NRDSLNVLEN FVYGDTPEQD GIRHVLDELQ AAAPEGQWEF LLGPLADQSN IRALPLKTLL VQLELRGLIA PRYAYYAEYR FKYLLEPDTL LERFEGERRD FVAAIIQTSS RARTWATVNF EAMYEQYSAE RNRVVKALDY FQEKGWVELE SKQMTEVYNV LRGDFDSQVL SAELHEYFTR HEQTEVARIH AMLELFATER CLGYRLAEYF GDHNAPQQCG HCSVCHGHVA RLPAPPELPA LVDKNFTELC GEFIHRHQQY AGSAPSAERL TRFLCGISVP LFTKLKARAI SGFAALEEYP YAEVRAWAQA HL
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