Gene Pfl01_0275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0275 
Symbol 
ID3713262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp320449 
End bp322377 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content60% 
IMG OID 
ProductATP-dependent DNA helicase RecQ 
Protein accessionYP_346008 
Protein GI77456503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0919838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAACA CCCTGGAACA GGTTTTCGGT TATCCACAGT TTCGACCCGG CCAGGAAGCG 
GCGATCAGCG CTGTGCTCGC CGGGCGCTCG GCAGCCGCGA TATTTCCCAC CGGCTCCGGC
AAATCCCTTT GTTACCAGGT CCCGGCACTC TTGCTGCCGC ACCTGACGCT GGTGGTCTCA
CCGTTGCTGG CGCTGATGCA GGATCAGCTC GAGTTCTTGC GCCGGCACGG GATATCCGCA
GGCAGCATCG ACTCGACGCA GAGCCGCGAA GACGCCAACG ATGTGATGGC CCGCGCCCGT
TCGGGCGAAT TGAAGATCCT GATGATTTCC GTGGAGCGTT TGAAGAACGA GCGCTTTCGC
AACTTTTTGC AGCAGGTGCC GATCTCGCTG CTGGTGGTGG ATGAGGCGCA CTGCATCTCC
GAATGGGGCC ACAACTTTCG CCCTGACTAC CTCAAGCTGC CGGACTACCA GCGTCAGTTC
AACATCCGGC AAACCTTGCT GCTGACCGCC ACGGCAACGC CGAAGGTCAT CGCCGACATG
CAGGCGAAAT TCTCCATTGC TGAAGACGAT GTGGTGACCA CCGGTTTCTA TCGGCCCAAC
CTCAATCTGC TGGTCGAGCC GGTGCGTGGG CAGGACAAGC GCCGACGGCT GGTGGAGTGG
ATGAGCGCGC GCGCGGGCCA GCCGAGCATC GTTTACGTCA CCCTGCAGAA AACCGCCGAG
CAGATTGCCG AACATCTGGA GCGCAATGGC ATTCAGGCCG AGGCTTACCA CGCCGGTTTG
CCCCATGAAC AGCGGGACGC GATCCAGAAG CGCTTCATGG GCGGGCAGTC CAATTGCATC
GTCGCCACCA TCGCCTTCGG CATGGGCATC GACAAGAGCG ACATCCGCAA CGTGGTGCAT
TTCGATCTGC CCAAATCCAT CGAAAACTAC AGCCAGGAAA TCGGTCGCGC CGGACGTGAC
GGGCAGCCCT CAGATTGTCT GGTACTGGCC AATCGCGACA GTCTCAACGT GCTGGAAAAC
TTCGTGTATG GCGACACGCC GGAGCAAGAT GGCATTCGTC ACGTGCTCGA CGAGTTGCAG
GCCGCCGCGC CCGAAGGCCA ATGGGAATTT CTGCTCGGAC CGCTGGCGGA TCAGAGCAAC
ATTCGCGCGC TGCCTTTGAA GACGTTACTG GTGCAGCTGG AGCTGCGAGG GCTGATTGCC
CCGCGCTACG CGTACTACGC CGAATATCGC TTCAAATACC TGCTGGAGCC CGACACGTTG
CTTGAGCGTT TCGAAGGTGA ACGAAGGGAT TTCGTCGCCG CGATCATCCA GACCTCAAGC
CGCGCACGCA CCTGGGCCAC GGTGAATTTC GAGGCGATGT ACGAGCAGTA TTCCGCCGAG
CGCAACCGGG TGGTGAAGGC CCTGGATTAT TTCCAGGAGA AGGGCTGGGT CGAGCTTGAG
AGCAAGCAGA TGACCGAGGT CTACAACGTC CTGCGTGGCG ATTTCGACAG CCAGGTCTTG
AGCGCTGAAC TGCATGAGTA CTTCACCCGC CATGAGCAAA CCGAAGTGGC GCGGATTCAC
GCCATGCTCG AGCTGTTCGC CACCGAGCGA TGCCTCGGTT ATCGGCTGGC CGAATATTTC
GGTGATCACA ATGCGCCGCA GCAATGCGGG CATTGCTCGG TGTGCCACGG GCACGTCGCC
CGGTTGCCGG CACCGCCGGA ATTGCCGGCG CTTGTGGATA AAAACTTTAC GGAGTTGTGT
GGGGAATTTA TCCACAGGCA TCAGCAGTAC GCTGGCAGTG CTCCGTCGGC CGAGCGGCTG
ACCCGGTTCC TCTGCGGAAT CAGTGTGCCG CTGTTTACCA AACTCAAGGC CCGGGCCATT
TCCGGGTTTG CGGCACTGGA GGAGTATCCC TACGCCGAGG TTCGGGCCTG GGCTCAGGCG
CATCTTTGA
 
Protein sequence
MHNTLEQVFG YPQFRPGQEA AISAVLAGRS AAAIFPTGSG KSLCYQVPAL LLPHLTLVVS 
PLLALMQDQL EFLRRHGISA GSIDSTQSRE DANDVMARAR SGELKILMIS VERLKNERFR
NFLQQVPISL LVVDEAHCIS EWGHNFRPDY LKLPDYQRQF NIRQTLLLTA TATPKVIADM
QAKFSIAEDD VVTTGFYRPN LNLLVEPVRG QDKRRRLVEW MSARAGQPSI VYVTLQKTAE
QIAEHLERNG IQAEAYHAGL PHEQRDAIQK RFMGGQSNCI VATIAFGMGI DKSDIRNVVH
FDLPKSIENY SQEIGRAGRD GQPSDCLVLA NRDSLNVLEN FVYGDTPEQD GIRHVLDELQ
AAAPEGQWEF LLGPLADQSN IRALPLKTLL VQLELRGLIA PRYAYYAEYR FKYLLEPDTL
LERFEGERRD FVAAIIQTSS RARTWATVNF EAMYEQYSAE RNRVVKALDY FQEKGWVELE
SKQMTEVYNV LRGDFDSQVL SAELHEYFTR HEQTEVARIH AMLELFATER CLGYRLAEYF
GDHNAPQQCG HCSVCHGHVA RLPAPPELPA LVDKNFTELC GEFIHRHQQY AGSAPSAERL
TRFLCGISVP LFTKLKARAI SGFAALEEYP YAEVRAWAQA HL