| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0260 |
|---|
| Symbol | ompR |
|---|
| ID | 3713247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 307575 |
|---|
| End bp | 308315 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | osmolarity response regulator |
|---|
| Protein accession | YP_345993 |
|---|
| Protein GI | 77456488 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.948807 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.553883 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCA CTGCACAAAC TGCTGAAGGC GAAAAAATTC TCATCGTTGA CGACGATCCG
GGGCTGAGCA GCCTGCTGGA ACGATTTTTC GTCAGCAAGG GCTACCGTGC CCGCGCCGTA
CCGAATACCG AGCAGATGGA TCGTCTGCTG TCGCGTGAAG TGTTCAACCT GGTCGTCCTC
GACCTGATGC TGCCGGGCGA AGACGGCCTG ACCGCTTGCC GCCGCCTGCG TGGCGCGAAC
AATCAGATTC CGATCATCAT GCTCACTGCC AAGGGTGACG AGCTGAGCCG TATCAAGGGC
CTGGAACTGG GCGCCGACGA CTACCTGGCC AAGCCGTTCA ACCCGGACGA GCTGATGGCT
CGCGTCAAAG CCGTGCTGCG CCGTCAGGCC GCGCCGGTGC CGGGCGCGCC GGGCAGTGAA
GAAGAAAACG TCACGTTCGG CGACTACGTG CTGTCCCTGG CCACCCGCGA ACTCAAACGC
GGCGACGAAG TGCACATGCT CACCACCGGC GAGTTTGCGG TACTCAAGGC CCTGGTGATG
AACGCCCGTC AGCCGCTGAC CCGCGACAAG CTGATGAACC TGGCCCGTGG CCGTGAGTGG
GATGCCCTGG AGCGTTCCAT CGACGTGCAG ATTTCCCGTC TGCGCCGGAT GATCGAACCC
GATCCTTCCA AGCCGCGCTA CATCCAGACT GTCTGGGGTG TCGGCTACGT GTTCGTGCCG
GATGGCAACT CCACCAAGTG A
|
|---|
| Protein sequence | MSSTAQTAEG EKILIVDDDP GLSSLLERFF VSKGYRARAV PNTEQMDRLL SREVFNLVVL
DLMLPGEDGL TACRRLRGAN NQIPIIMLTA KGDELSRIKG LELGADDYLA KPFNPDELMA
RVKAVLRRQA APVPGAPGSE EENVTFGDYV LSLATRELKR GDEVHMLTTG EFAVLKALVM
NARQPLTRDK LMNLARGREW DALERSIDVQ ISRLRRMIEP DPSKPRYIQT VWGVGYVFVP
DGNSTK
|
|---|
| |