Gene Pfl01_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0242 
Symbol 
ID3712134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp285581 
End bp286330 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content61% 
IMG OID 
Productputative amino-acid ABC transporter ATP-binding protein YecC 
Protein accessionYP_345975 
Protein GI77456470 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0762427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.744864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTCG TGGAAAAACT GACAAAGCAG TTCAAGGGTC AAGTCGTGCT CAACGGCATT 
GACCTGGAGG TGAAGGAAGG CGAGGTCGTG GCAATCATCG GGCCCAGCGG CTCGGGCAAG
ACCACGTTCC TGCGTTGCCT GAACTTCCTC GAGGAACCCA CCAGCGGCCG GATCAAGGTC
GGCGAGATCG AGATCGATAC CAGTCGCCCG CTGAACCAGC AGCAGAACCT GGTGCGCAAC
CTGCGCCAGC ACGTGGGCTT CGTGTTCCAG AACTTCAACC TGTTCCCCCA CCGCACCGCC
CTGGAAAACG TCATCGAAGG CCCGATCGTG GTCAAGAAGA CGCCTCGCGA TGCAGCCATT
GCCCTGGGCA AGAAGCTGCT GGCCAAGGTT GGCCTGGCGG GCAAGGAAGA CGCCTACCCA
CGGCGCCTGT CCGGTGGCCA GCAACAGCGC GTGGCGATTG CCCGGGCGCT GGCGATGGAG
CCGGAAGTGA TCCTGTTCGA CGAGCCGACC TCGGCCCTCG ATCCGGAACT GGTAGGTGAA
GTGCTGGCGA CCATCCGCGG CCTCGCCGAG GAGAAACGCA CCATGGTGAT CGTCACCCAC
GAAATGGCGT TCGCCCGTGA CGTGGCCAAC CGCGTGGTGT TTTTCGATAA AGGCGTGATC
GTCGAACAAG GCGAAGCGAA AGCGTTGTTT GCCAATCCGA AAGAAGAACG CACTCGACAG
TTCCTCAGCA AGTTCAGAAA CAACGGCTGA
 
Protein sequence
MIVVEKLTKQ FKGQVVLNGI DLEVKEGEVV AIIGPSGSGK TTFLRCLNFL EEPTSGRIKV 
GEIEIDTSRP LNQQQNLVRN LRQHVGFVFQ NFNLFPHRTA LENVIEGPIV VKKTPRDAAI
ALGKKLLAKV GLAGKEDAYP RRLSGGQQQR VAIARALAME PEVILFDEPT SALDPELVGE
VLATIRGLAE EKRTMVIVTH EMAFARDVAN RVVFFDKGVI VEQGEAKALF ANPKEERTRQ
FLSKFRNNG