Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0084 |
Symbol | |
ID | 3717783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 88963 |
End bp | 90264 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | cytochrome c, class I |
Protein accession | YP_345817 |
Protein GI | 77456312 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTC TCGTTATCGC GACCCTGGCG CTGCTCGGCA GCGCTGCCGT TCATGGCGCC GAAGTTGATC AATCCCTGAT CAAAAAAGGC GAATACCTCG CCCGTGCCGG TGATTGCGTG GCCTGCCACA CGGCCAAGGA CGGCAAGCCG TTCGCCGGTG GCCTGCCGAT GGAAACCCCG ATCGGCACGA TCTACTCGAC CAACATCACA CCGGACAAAA CCGGTGTCGG TGACTACAGT TTCGAGGACT TCGACCAAGC CTTGCGCCAT GGCGTGGCCA AAAACGGCAG TACCTTGTAC CCGGCGATGC CGTATCCGTC CTACGCCCGT GTCAGCGAAC CCGACATGCA GGCGCTCTAC GCCTACTTCA TGCACGGCGT GGAACCGGTG GCGCAAGAGA ACAAGGCCAG CGACATCCCG TGGCCCTTGA GCATGCGCTG GCCACTGATG GGCTGGCGCT GGCTGTTTGC GCCGAAGGTC GAGGACTACA AACCCGCGTC GGACGATGCC GTCGTCAGCC GTGGGGCATA TCTGGTGGAA GGCCTCGGAC ATTGCGGCGC CTGCCATACG CCACGGGCCC TGACCATGCA GGAAAAATCC CTGAGCGCAG CCGAAGGCAG CAGTTTTCTG TCAGGCAGTG CGCCGCTGGA AGGCTGGATC GCCAAGAGCC TGCGCGGCGA CCACAAGGAC GGCCTCGGCA GCTGGAGCGA AGAGCAACTG GTGCAGTTTC TCAAGACCGG GCGCAGCGAC CGCAGTGCGG TGTTCGGCGG CATGAGCGAC GTGGTCACCC ACAGCATGCA GTACATGACC GACGCCGACC TGACCGCGAT TGCCCGTTAC CTGAAATCGC TGCCGGCCAA TGACCCTGCC GACCAGCCGC ACCAGTACGA CGAAAAAGCT GCCAAGGCCT TGTGGAACGG TGACGACAGT CAGCGCGGTG CGTCGGTCTA CATCGACAAC TGTGCGGCGT GCCACCGCAC GGACGGCCAT GGCTACACCC GGGTGTTCCC GGCGCTGGCA GGCAATCCGG TGCTGCAATC GGACGACCCG ACTTCGCTGA TCCACATCGT GCTCAAGGGT GGAACGCTGC CGGCGACGCA CGCGGCACCG TCCACCTTCA CCATGCCCGG TTTCGCCTGG CGCCTGTCGG ATCAGGAAGT GGCGGATGTC GTGAGCTTCA TCCGTGGCAG TTGGGGCAAC AAGGGCGCGC CCGTCAAGGC CGCTGATGTC GCCGAATTGC GCAAGGACGA TATGAAGCAA ACCTCGAACG ATGACCTCGG CCAGGTGACA CAGCACAACT GA
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Protein sequence | MKTLVIATLA LLGSAAVHGA EVDQSLIKKG EYLARAGDCV ACHTAKDGKP FAGGLPMETP IGTIYSTNIT PDKTGVGDYS FEDFDQALRH GVAKNGSTLY PAMPYPSYAR VSEPDMQALY AYFMHGVEPV AQENKASDIP WPLSMRWPLM GWRWLFAPKV EDYKPASDDA VVSRGAYLVE GLGHCGACHT PRALTMQEKS LSAAEGSSFL SGSAPLEGWI AKSLRGDHKD GLGSWSEEQL VQFLKTGRSD RSAVFGGMSD VVTHSMQYMT DADLTAIARY LKSLPANDPA DQPHQYDEKA AKALWNGDDS QRGASVYIDN CAACHRTDGH GYTRVFPALA GNPVLQSDDP TSLIHIVLKG GTLPATHAAP STFTMPGFAW RLSDQEVADV VSFIRGSWGN KGAPVKAADV AELRKDDMKQ TSNDDLGQVT QHN
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