Gene Pfl01_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0084 
Symbol 
ID3717783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp88963 
End bp90264 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content63% 
IMG OID 
Productcytochrome c, class I 
Protein accessionYP_345817 
Protein GI77456312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTC TCGTTATCGC GACCCTGGCG CTGCTCGGCA GCGCTGCCGT TCATGGCGCC 
GAAGTTGATC AATCCCTGAT CAAAAAAGGC GAATACCTCG CCCGTGCCGG TGATTGCGTG
GCCTGCCACA CGGCCAAGGA CGGCAAGCCG TTCGCCGGTG GCCTGCCGAT GGAAACCCCG
ATCGGCACGA TCTACTCGAC CAACATCACA CCGGACAAAA CCGGTGTCGG TGACTACAGT
TTCGAGGACT TCGACCAAGC CTTGCGCCAT GGCGTGGCCA AAAACGGCAG TACCTTGTAC
CCGGCGATGC CGTATCCGTC CTACGCCCGT GTCAGCGAAC CCGACATGCA GGCGCTCTAC
GCCTACTTCA TGCACGGCGT GGAACCGGTG GCGCAAGAGA ACAAGGCCAG CGACATCCCG
TGGCCCTTGA GCATGCGCTG GCCACTGATG GGCTGGCGCT GGCTGTTTGC GCCGAAGGTC
GAGGACTACA AACCCGCGTC GGACGATGCC GTCGTCAGCC GTGGGGCATA TCTGGTGGAA
GGCCTCGGAC ATTGCGGCGC CTGCCATACG CCACGGGCCC TGACCATGCA GGAAAAATCC
CTGAGCGCAG CCGAAGGCAG CAGTTTTCTG TCAGGCAGTG CGCCGCTGGA AGGCTGGATC
GCCAAGAGCC TGCGCGGCGA CCACAAGGAC GGCCTCGGCA GCTGGAGCGA AGAGCAACTG
GTGCAGTTTC TCAAGACCGG GCGCAGCGAC CGCAGTGCGG TGTTCGGCGG CATGAGCGAC
GTGGTCACCC ACAGCATGCA GTACATGACC GACGCCGACC TGACCGCGAT TGCCCGTTAC
CTGAAATCGC TGCCGGCCAA TGACCCTGCC GACCAGCCGC ACCAGTACGA CGAAAAAGCT
GCCAAGGCCT TGTGGAACGG TGACGACAGT CAGCGCGGTG CGTCGGTCTA CATCGACAAC
TGTGCGGCGT GCCACCGCAC GGACGGCCAT GGCTACACCC GGGTGTTCCC GGCGCTGGCA
GGCAATCCGG TGCTGCAATC GGACGACCCG ACTTCGCTGA TCCACATCGT GCTCAAGGGT
GGAACGCTGC CGGCGACGCA CGCGGCACCG TCCACCTTCA CCATGCCCGG TTTCGCCTGG
CGCCTGTCGG ATCAGGAAGT GGCGGATGTC GTGAGCTTCA TCCGTGGCAG TTGGGGCAAC
AAGGGCGCGC CCGTCAAGGC CGCTGATGTC GCCGAATTGC GCAAGGACGA TATGAAGCAA
ACCTCGAACG ATGACCTCGG CCAGGTGACA CAGCACAACT GA
 
Protein sequence
MKTLVIATLA LLGSAAVHGA EVDQSLIKKG EYLARAGDCV ACHTAKDGKP FAGGLPMETP 
IGTIYSTNIT PDKTGVGDYS FEDFDQALRH GVAKNGSTLY PAMPYPSYAR VSEPDMQALY
AYFMHGVEPV AQENKASDIP WPLSMRWPLM GWRWLFAPKV EDYKPASDDA VVSRGAYLVE
GLGHCGACHT PRALTMQEKS LSAAEGSSFL SGSAPLEGWI AKSLRGDHKD GLGSWSEEQL
VQFLKTGRSD RSAVFGGMSD VVTHSMQYMT DADLTAIARY LKSLPANDPA DQPHQYDEKA
AKALWNGDDS QRGASVYIDN CAACHRTDGH GYTRVFPALA GNPVLQSDDP TSLIHIVLKG
GTLPATHAAP STFTMPGFAW RLSDQEVADV VSFIRGSWGN KGAPVKAADV AELRKDDMKQ
TSNDDLGQVT QHN