Gene Pfl01_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0022 
Symbol 
ID3717641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp24161 
End bp25075 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content64% 
IMG OID 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_345755 
Protein GI77456250 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0449808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCC GCACCGACGC CGTAAAGGCC TATCTGCTCG ACCTGCAAGA CCGCATCTGC 
GCCGCGCTGG AAACTGAAGA CGGCGGCACG CGCTTCGTCG AAGACGCCTG GACCCGTCCG
GCCGGCGGTG GCGGTCGGAC CCGGGTGATC GAGAACGGCA CGGTGATCGA AAAGGGCGGC
GTCAACTTTT CCCACGTCTT CGGCAGTGGC CTGCCACCGT CTGCCAGCGC CCATCGGCCG
GAACTGGCCG GGCGTGGTTT CGAAGCCCTT GGTGTGTCGC TGGTGATCCA CCCGCACAAC
CCGCATGTGC CGACGTCCCA CGCCAACGTG CGCTTTTTCA TCGCCGAGAA GGAAGGTGAA
GAACCGGTCT GGTGGTTCGG CGGTGGTTTC GACCTGACCC CGTACTACGG CAACGAAGAA
GACTGCATAC ACTGGCACCG CGTCGCCGAA AAGGCGTGCG CGCCGTTCGG TCCGGACGTC
TACCCGCGCT ACAAGGCCTG GTGCGACACC TATTTCCACA TCAAGCATCG CCACGAGCCG
CGCGGCATCG GCGGCCTGTT CTTCGATGAC CTGAACGAGT GGGATTTCGA CACCAGTTTC
GCCTTCATGC GCGCCATCGG CGATGCGTAC ATCGACGCTT ACCTGCCGAT CGTGCAGCGC
CGCAAGAACG ACGCCTTCAC CGCCAGGCAG CGTGAGTTCC AGGAATTCCG CCGCGGCCGC
TACGTCGAGT TCAACCTGGT TTACGACCGT GGCACCCTGT TCGGCCTGCA ATCGGGCGGG
CGCACCGAGT CGATCCTGAT GTCGCTGCCG CCGCAAGTGC GCTGGGCCTA CGACTGGAAA
GCCGAACCGG GCAGCGAAGA AGCGCGCCTG ACCGAGTACT TCCTGCAAGA TCGCGACTGG
CTAGCCCAGG CCTGA
 
Protein sequence
MTTRTDAVKA YLLDLQDRIC AALETEDGGT RFVEDAWTRP AGGGGRTRVI ENGTVIEKGG 
VNFSHVFGSG LPPSASAHRP ELAGRGFEAL GVSLVIHPHN PHVPTSHANV RFFIAEKEGE
EPVWWFGGGF DLTPYYGNEE DCIHWHRVAE KACAPFGPDV YPRYKAWCDT YFHIKHRHEP
RGIGGLFFDD LNEWDFDTSF AFMRAIGDAY IDAYLPIVQR RKNDAFTARQ REFQEFRRGR
YVEFNLVYDR GTLFGLQSGG RTESILMSLP PQVRWAYDWK AEPGSEEARL TEYFLQDRDW
LAQA