Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0022 |
Symbol | |
ID | 3717641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 24161 |
End bp | 25075 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_345755 |
Protein GI | 77456250 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0449808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACCC GCACCGACGC CGTAAAGGCC TATCTGCTCG ACCTGCAAGA CCGCATCTGC GCCGCGCTGG AAACTGAAGA CGGCGGCACG CGCTTCGTCG AAGACGCCTG GACCCGTCCG GCCGGCGGTG GCGGTCGGAC CCGGGTGATC GAGAACGGCA CGGTGATCGA AAAGGGCGGC GTCAACTTTT CCCACGTCTT CGGCAGTGGC CTGCCACCGT CTGCCAGCGC CCATCGGCCG GAACTGGCCG GGCGTGGTTT CGAAGCCCTT GGTGTGTCGC TGGTGATCCA CCCGCACAAC CCGCATGTGC CGACGTCCCA CGCCAACGTG CGCTTTTTCA TCGCCGAGAA GGAAGGTGAA GAACCGGTCT GGTGGTTCGG CGGTGGTTTC GACCTGACCC CGTACTACGG CAACGAAGAA GACTGCATAC ACTGGCACCG CGTCGCCGAA AAGGCGTGCG CGCCGTTCGG TCCGGACGTC TACCCGCGCT ACAAGGCCTG GTGCGACACC TATTTCCACA TCAAGCATCG CCACGAGCCG CGCGGCATCG GCGGCCTGTT CTTCGATGAC CTGAACGAGT GGGATTTCGA CACCAGTTTC GCCTTCATGC GCGCCATCGG CGATGCGTAC ATCGACGCTT ACCTGCCGAT CGTGCAGCGC CGCAAGAACG ACGCCTTCAC CGCCAGGCAG CGTGAGTTCC AGGAATTCCG CCGCGGCCGC TACGTCGAGT TCAACCTGGT TTACGACCGT GGCACCCTGT TCGGCCTGCA ATCGGGCGGG CGCACCGAGT CGATCCTGAT GTCGCTGCCG CCGCAAGTGC GCTGGGCCTA CGACTGGAAA GCCGAACCGG GCAGCGAAGA AGCGCGCCTG ACCGAGTACT TCCTGCAAGA TCGCGACTGG CTAGCCCAGG CCTGA
|
Protein sequence | MTTRTDAVKA YLLDLQDRIC AALETEDGGT RFVEDAWTRP AGGGGRTRVI ENGTVIEKGG VNFSHVFGSG LPPSASAHRP ELAGRGFEAL GVSLVIHPHN PHVPTSHANV RFFIAEKEGE EPVWWFGGGF DLTPYYGNEE DCIHWHRVAE KACAPFGPDV YPRYKAWCDT YFHIKHRHEP RGIGGLFFDD LNEWDFDTSF AFMRAIGDAY IDAYLPIVQR RKNDAFTARQ REFQEFRRGR YVEFNLVYDR GTLFGLQSGG RTESILMSLP PQVRWAYDWK AEPGSEEARL TEYFLQDRDW LAQA
|
| |