| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4606 |
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| Symbol | pgaA |
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| ID | 8533056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 5049272 |
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| End bp | 5051734 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | outer membrane protein PgaA |
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| Protein accession | YP_003261901 |
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| Protein GI | 261823795 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTG TTAACTCTCA TTCAAGCAGA CTCAACCCAA TATTGTTTAA CTTACTTAAA
TCATTAGTTT ATTTTTCCGT TTCTGTCGGC GTCGCGGCGG CAGAATCTCA CTATGACACG
CTAATTAGCA ACGCCCGGCA GGGAGATATC TCCCCTGCGA CGTCATGGCT TGATGGGCAA
TCCAGGAATC GCGAACTGAC CGCTGCCGAG GTGACCGACT GGTTGCTCAT TAACGGTTGG
GCGGGAAAGG ATGCAGAAGT GATCCGAATT TGGAAAACCT ATTCGCCAAC GATGTCACTA
CCTGACCCGG CACAGAGGGC GGCGGCGAAG TCCTACCGTA ATCTCCGTCA GTGGCAGTCG
TCGGTGGAAT TATGGCAGCG GGTTTTACAA CGTACTCCAC GGGATGATGA TGCACGTAGT
GGTTTGATAC TCACCCTCGC CGATGCCGGG CAGACAAAAA GGTCGCTGGA ATTGGCTACG
TCTCGTGTTA AACGCGAGCC AACGGCGAAC CATTGGCGAG AATTAGCGTG GGTGCAGCGT
ATTGCGGGGC AACATACTGA CTCCCTCTTT TCTATCATGC AGGCCATGCG CTACGCCCCG
CAGGATAAAA CACTGCTTTC TGATTACAGC GATATTCTTT CACGTAATAC GATTAGCGCA
CCTGCATTGA ACGCGTTGAA GGACAGCAAA CGTCATGTCT TCCAGACTGA TGAAAGGCAA
CGCCCGCGAG AGTTGGAGGC GGCGGCGGAA CTGGTCCGTC TTGCGTTTAT CACGTCCACA
ACGGAAAACG AACGCTTCGT TGTCGCGGAT CGCGCTTTGG CCCGTTATAG CAGCTTGATG
AATCAATGGC GAACGCTTCC TTCGGCAAAA GCCAGCTATC GCCATGCTCG AATTGATCGG
CTAGGTGCGT TGCTCGTCCG CTATCGCATG GAAGAAATTA TTTCGGAATA CCAATCACTC
CTCAAAGAGG GGGATATTCC CAGCTATGCA CGACGCTGGG TGGCTTCTGC TTATCTCTAT
TTGAAGCAGC CTGAAAAAGC AGAGCAGATC CTCAGTTCGG TAATACAAGA AGACCCTTCA
CAATACGTTC AGATAGTGCG GCAAGGCGAT TTTTTCTACA GCCTCCTGGA AAATGAGAAA
GTTGAGCAGG CAGCGCGGCT GTCAGCTCAG GCTGAAGAAA AAACGCCTTA TAAGAAAAGA
GTTTATGGCT TATCAAGCTT CATCCCTAAC GACGATTGGG TTGACATCAA ATACCTGCGT
ATACAGTCGT TGGTTTCTCA TAACGATCTT CCTGCTGCGC AACGGTTGGC GGAAAATCTG
GCCTTGGGCG GGCCGGGGAA CCAAGAGCTG AATATACGTT TGGCCGAGAT TTATCTAAAC
AGGGGATGGC CGCGTCGTGC CGAAACGTTA TTAAAGCGAG CTGAATTGTT GGAAGCCAGA
TCGTTCCGGC TGGAAACTCA TCAAGGGCTT ACGGCATTGG AGTTGCAGGA GTGGCGCCAG
CTTGATCAGT TGGCCGACGA TACCGTGGCT CGCTACCCGG ATGATTTCTC TGTGAAACGA
TTAGCGCGTT TGCGTCAGGT TCATCACATG GCGGAGCTGC GTATTTCCGG CGCTCAGGGC
CTCAAGTCTG ACAGTCCAGC CAAGGGCATG AATGACACTA ATATTGATGC CGTGCTCTAT
AGCCCGCCAT TTGCCGACCA TTGGCGAGTG TTCTCTGGGG GGGCTTTTAA TCAAAGTGAT
TTCACTGAAG GACGGGGTAT TCATCGCACT ATGCGCGGCG GTGTGGAATT TACCGACCGT
GACAATTGGG CTGAGGTTGA GCTTTCACAC CGAAATTTCG GATTTGGCTC TGATATCGGC
GCGAGTCTCT CTTATCGACA TGACATTAAT GACTTTTGGC GTGTCGGCCT GAATGCTGAA
CGGCTAATGC GCAGCACGCC GCTACGCGCA CTTAAAAATG ACGTAACGGC GAATGGCGGC
GGGGGATATG TACGCTGGCG GCAAAGCGAA CGACGCTCAT GGCAAGCAGA CCTGTCGAAC
GGGTGGTTTT CTGATGGTAA CAGACGTCAG GAGTATGCGC TGAGCGGGCA AGAGCGCCTC
TTTTCATCAT CGTTTTTAAT CCTGGATTTC ACCCCGACGA TCAATTGGGG AGCAAACAGC
AAGCAGGCTG TTTCTTATTA CAACCCGCAG AGTTATGTGG CCGTGCTACC CGCCTTTACC
CTCGATCACT TGCTTTACCG ACATTACCAG ACGGAGTGGC ATCAAGAAGT GAAGGCTGGC
GCGGGGCGTT ACTGGCAAAA AGGTGAATCC GCAGGGGCTA TCACCACGCT CGGATATGGG
CAAAGAGTAC GGTGGAATGA CGTACTGGAT ATGGGGGTGA GTGCTCAGTG GGATAAGCGG
CCTTACGACG GTAAGCGGGA ACAGAACGTA TCGCTGTCTT TTGATTTGAA TTATCGGTTT
TAA
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| Protein sequence | MSFVNSHSSR LNPILFNLLK SLVYFSVSVG VAAAESHYDT LISNARQGDI SPATSWLDGQ
SRNRELTAAE VTDWLLINGW AGKDAEVIRI WKTYSPTMSL PDPAQRAAAK SYRNLRQWQS
SVELWQRVLQ RTPRDDDARS GLILTLADAG QTKRSLELAT SRVKREPTAN HWRELAWVQR
IAGQHTDSLF SIMQAMRYAP QDKTLLSDYS DILSRNTISA PALNALKDSK RHVFQTDERQ
RPRELEAAAE LVRLAFITST TENERFVVAD RALARYSSLM NQWRTLPSAK ASYRHARIDR
LGALLVRYRM EEIISEYQSL LKEGDIPSYA RRWVASAYLY LKQPEKAEQI LSSVIQEDPS
QYVQIVRQGD FFYSLLENEK VEQAARLSAQ AEEKTPYKKR VYGLSSFIPN DDWVDIKYLR
IQSLVSHNDL PAAQRLAENL ALGGPGNQEL NIRLAEIYLN RGWPRRAETL LKRAELLEAR
SFRLETHQGL TALELQEWRQ LDQLADDTVA RYPDDFSVKR LARLRQVHHM AELRISGAQG
LKSDSPAKGM NDTNIDAVLY SPPFADHWRV FSGGAFNQSD FTEGRGIHRT MRGGVEFTDR
DNWAEVELSH RNFGFGSDIG ASLSYRHDIN DFWRVGLNAE RLMRSTPLRA LKNDVTANGG
GGYVRWRQSE RRSWQADLSN GWFSDGNRRQ EYALSGQERL FSSSFLILDF TPTINWGANS
KQAVSYYNPQ SYVAVLPAFT LDHLLYRHYQ TEWHQEVKAG AGRYWQKGES AGAITTLGYG
QRVRWNDVLD MGVSAQWDKR PYDGKREQNV SLSFDLNYRF
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