Gene Pecwa_4555 details

Gene Information

• Locus tag: Pecwa_4555
• ID: 8533005
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 4998090
• End bp: 4998770
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 58%
• Product: binding-protein-dependent transport systems inner membrane component
• Protein accession: YP_003261851
• Protein GI: 261823745

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGAAT GGTTTTTCGA TCTCAGCCAC TGGTATGGCG ATGACGGCAT TGTACCGCTG 
TTGTTGCAGC ATATCGGTTA CAGCGCGGTG GCGCTGGCGA TTGCTGTCGC CATTGCTTTC 
CCGGTTGGCT GCTACACCGG ACATACCGGG AAAGGGGAGG CGCTACTGAT TGGCACCACC 
AACGCCCTGC GATCGCTGCC TTCATTTGGC CTGATTATTT TGCTGGTGAT CCTGCTGGCG 
GGCTATTTCG AATCGGATAT GGCGTTTGTG CTGCCCTGCA TCATCGTGCT GGTGGTGCTG 
GCGTTGCCGC CAGTGGCGCT GGGCGTGCAC GCGGGTATCC GCTCTGTTGA TCCCAGCGTG 
CATGACGCGG CAAATGGGAT TGGCCTGACG CCGCTTCAGG TGCTGTGGCA AGTCGAGTTG 
CCTTGCGCGA TGCCGCTAAT CCTCTCTGGG ATCCGCAGCG CGGCATTGCA GATTGTCTCC 
ACCGCGACCA TCGCGGCATA CGTTTCACTC GGCGGTCTGG GACGGTTGAT TATCGACGGA 
CGCGCTGCCA ATGACTTTGC GCAGATGACG GCCGGGGCTC TCCTTGTCGC GCTGCTGGCA 
TTGGTCATTG ATCTCTTTTT TTCGTTTTCA GGGAAAGTCG TGGTTTCACC GGGCATCACC 
CGGAAAACCA AAAATCAGTG A 

 

Protein sequence

MTEWFFDLSH WYGDDGIVPL LLQHIGYSAV ALAIAVAIAF PVGCYTGHTG KGEALLIGTT 
NALRSLPSFG LIILLVILLA GYFESDMAFV LPCIIVLVVL ALPPVALGVH AGIRSVDPSV 
HDAANGIGLT PLQVLWQVEL PCAMPLILSG IRSAALQIVS TATIAAYVSL GGLGRLIIDG 
RAANDFAQMT AGALLVALLA LVIDLFFSFS GKVVVSPGIT RKTKNQ