| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4358 |
|---|
| Symbol | |
|---|
| ID | 8532801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 4780972 |
|---|
| End bp | 4781871 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | carboxylate/amino acid/amine transporter |
|---|
| Protein accession | YP_003261657 |
|---|
| Protein GI | 261823551 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCATTAC TTATTATCAC CACGATCTTG TGGGCATTTT CATTCAGCTT GATTGGCGAA
TATCTGGCGG GTCAGGTCGA TAGCTGGTTT TCTGCGATGT TCCGCCTGAC GGCGGCGGCG
GTGGTATTTT TGCCGTTCTT ACGTTGGCGG GGCTACGCGC CGCGCGTCAT TTGTTTGTAT
ATGTTAGTAG GTGCTTGCCA ACTTGGTATC ATGTACCTGT TCGTGTTCCA GGCTTACCTA
TACCTGACCG TACCTGAGTT TTTACTTTTC ACAGTGATGA CGCCGTTGTA CGTCACGCTA
ATTTACGATC TGCTTGCCCG ACAGCGCCTG CGTTGGGGCT ATGCTATGAG TGCGCTTCTG
GCAGTATTCG GCGCAGCCGT GATCCACTAT CACGGCGTGA GCGAGCATTT CTGGTGGGGG
TTCCTGCTGG TGCAGGTGGC TAACGTGTGT TTTGCCGCAG GCCAGGTTGG CTATAAGCGC
CTGATGGAGA TTCATCCTGT GCCGCAGCAC TGCGCGTTTT CCTGGTTTTA TCTGGGAGCG
GCAATCGTGA CGATAGTCGC GTGGCTGCTC TTCGGTAATA TGGCTAAGCT ACCCACCACA
ACCTTGCAGT GGGGCGTACT GGCCTGGCTG GGGATTGGCG CTTCAGGCTT GGGTTATTTT
ATGTGGAACT ATGGCGCAAC CCAGGTGGAT GCCGGAACGC TCAGCATAAT GAATAACTTT
CACGTGCCGG CTGGGCTACT GGTCAACTTC GCCATTTGGC ACAAAACGCC AGATTGGCTG
AGCTTTATCG TGGGGACGGC AATCATTACG TCCTCGCTGT GGGTGCACCA GCATTGGGTC
GTGAAGCGTC CTTCACGAAC GGTAAATGAT CACAAGCGTG CTGACGCGCC GAACGAATAA
|
|---|
| Protein sequence | MPLLIITTIL WAFSFSLIGE YLAGQVDSWF SAMFRLTAAA VVFLPFLRWR GYAPRVICLY
MLVGACQLGI MYLFVFQAYL YLTVPEFLLF TVMTPLYVTL IYDLLARQRL RWGYAMSALL
AVFGAAVIHY HGVSEHFWWG FLLVQVANVC FAAGQVGYKR LMEIHPVPQH CAFSWFYLGA
AIVTIVAWLL FGNMAKLPTT TLQWGVLAWL GIGASGLGYF MWNYGATQVD AGTLSIMNNF
HVPAGLLVNF AIWHKTPDWL SFIVGTAIIT SSLWVHQHWV VKRPSRTVND HKRADAPNE
|
|---|
| |