| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4252 |
|---|
| Symbol | |
|---|
| ID | 8532695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 4697354 |
|---|
| End bp | 4698505 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | acetylornithine deacetylase |
|---|
| Protein accession | YP_003261583 |
|---|
| Protein GI | 261823477 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.167911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGATGA ATTTACCCCC TTTTATTGAG CTATATCGGG CATTGATCGC CACACCCTCC
ATCAGCGCCA CCGACAGCGC GCTCGATCAA AGTAATCATA CCTTAATCAA CCTGCTGGCA
GGCTGGTTCG GCGATCTCGG CTTCCATGTT GAAGTCCAAC CAGTGCCCGG CACCCTCAAT
AAATTTAATA TGCTGGCGCG GATTGGTGAA GGAAAAGGCG GCTTATTGTT GGCAGGGCAC
ACCGACACCG TCCCCTTCGA CGATGGCCGC TGGACACGTG ATCCTTTCAC GCTGACGGAA
CACGACAACA AGCTGTATGG CTTGGGTACA GCGGATATGA AAGGGTTCTT TGCCTTTATT
CTGGATGCCT TACGCGATAT CGATCCAACC AAACTCACGA AGCCGCTCTA TGTGCTGGCG
ACGGCGGATG AAGAGACGAC CATGGCGGGT GCCAAGTATT TCTCCGAATC CACGCAGATT
CGCCCGGACT GCGCCATCAT CGGCGAACCC ACCTCGCTGC AACCGGTGCG TGCGCACAAA
GGCCATATGT CCAACGCGAT CCGTATTCAG GGGCAATCCG GCCATTCCAG CGATCCTTCA
CGCGGCGTGA ATGCGATTGA GCTGATGCAC GAGGCGATTT CCCACTTGCT GGTGCTGCGT
AACACGCTAC AGGAGCGCTA TCACAACCCG ATTTTCCACA TTCCTCACCC GACCATGAAC
CTTGGTCATA TTCACGGCGG CGATGCAGCC AACCGTATCT GCGGCTGCTG TGAACTGCAT
ATGGATATTC GTCCATTGCC GGGCATGACG CTTAACGATC TCGATGGACT GCTGTCTGAA
GCGCTTGAGC CTGTTAGTCA GCGCTGGCCG GGTCGGTTGA CCATCAGCGA ACTGCATCCG
CCGATTCCTG GCTATGAGTG CCCGCCGGAT CACCGTCTGG TATCAGTCGT GGAGAATCTA
CTGGGGACGA AAACAGAAAT TGTGAACTAC TGCACCGAAG CGCCGTTTAT TCAGACGCTG
TGTCCGACGC TGGTTCTGGG GCCAGGATCG ATCGAGCAGG CACACCAGCC GGATGAATAC
ATTGATACCG CGTTTATCAA ACCGACGCGG GAACTGATTT CGCAGGTTAT TCATCACTTC
TGCCACCACT GA
|
|---|
| Protein sequence | MKMNLPPFIE LYRALIATPS ISATDSALDQ SNHTLINLLA GWFGDLGFHV EVQPVPGTLN
KFNMLARIGE GKGGLLLAGH TDTVPFDDGR WTRDPFTLTE HDNKLYGLGT ADMKGFFAFI
LDALRDIDPT KLTKPLYVLA TADEETTMAG AKYFSESTQI RPDCAIIGEP TSLQPVRAHK
GHMSNAIRIQ GQSGHSSDPS RGVNAIELMH EAISHLLVLR NTLQERYHNP IFHIPHPTMN
LGHIHGGDAA NRICGCCELH MDIRPLPGMT LNDLDGLLSE ALEPVSQRWP GRLTISELHP
PIPGYECPPD HRLVSVVENL LGTKTEIVNY CTEAPFIQTL CPTLVLGPGS IEQAHQPDEY
IDTAFIKPTR ELISQVIHHF CHH
|
|---|
| |